SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001043318
Gene Symbol: ELMSAN1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr14:g.73718205T>A COSN9617828 C0094T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6871-5p ctCTCCCATtgctgc CAUGGGAG m7b (m6b->m7b) HHHNA_7055_C14orf43|NM_001043318|exon_utr3|-5.01123473225845|1.85539688916343
hsa-miR-6788-5p cTCTCCCAttgctgc CUGGGAGA m7b Created HHHNA_7055_C14orf43|NM_001043318|exon_utr3|-5.01123473225845|1.85539688916343
hsa-miR-8085 CTCTCCCAttgctgc UGGGAGAG m8a Created HHHNA_7055_C14orf43|NM_001043318|exon_utr3|-5.01123473225845|1.85539688916343
hsa-miR-3908 ctctccCATTGCTgc GAGCAAUG m7b Created HHHNA_7055_C14orf43|NM_001043318|exon_utr3|-5.01123473225845|1.85539688916343
hsa-miR-545-3p ctctcccTTTGCTGc UCAGCAAA m7b Disrupted HHHNA_7055_C14orf43|NM_001043318|exon_utr3|-5.01123473225845|1.85539688916343

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser