SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042603
Gene Symbol: KDM5A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.293006T>G COSM3398694 TCGA-76-6661-01 [central_nervous_system][brain][glioma][astrocytoma_Grade_IV]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1250-3p ttAAAATGaggtgca ACAUUUUC m6b Created HPHES_1959_G2607.1_402182
hsa-miR-590-3p tTAAAATTAggtgca UAAUUUUA m8a (m8a->m7a) HPHES_1959_G2607.1_402182
hsa-miR-4775 ttAAAATTAggtgca UUAAUUUU m7b (m7b->m6b) HPHES_1959_G2607.1_402182
hsa-miR-4735-5p ttaAAATTAGGtgca CCUAAUUU m8a Disrupted HPHES_1959_G2607.1_402182
hsa-miR-590-3p tTAAAATTAggtgca UAAUUUUA m8a (m8a->m7a) HPHES_1959_G2607.1_402182
hsa-miR-4775 ttAAAATTAggtgca UUAAUUUU m7b (m7b->m6b) HPHES_1959_G2607.1_402182
hsa-miR-4735-5p ttaAAATTAGGtgca CCUAAUUU m8a Disrupted HPHES_1959_G2607.1_402182

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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