SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042603
Gene Symbol: KDM5A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.292943G>T COSM4694987 T2269 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4768-5p gaaGAGAGAAagaaa AUUCUCUC m7b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-7110-3p gaAGAGAGAaagaaa UCUCUCUC m7a (m7a->m6a) HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6873-3p gaAGAGAGAAagaaa UUCUCUCU m8a Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6833-3p gaaGAGAGAAAgaaa UUUCUCUC m8a Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6817-3p gaAGAGAGAaagaaa UCUCUCUG m7a (m7a->m6a) HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6809-3p gaagAGAGAAagaaa CUUCUCUU m6b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-3675-3p gaAGAGATaaagaaa CAUCUCUA m6b Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-7110-3p gaAGAGAGAaagaaa UCUCUCUC m7a (m7a->m6a) HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6873-3p gaAGAGAGAAagaaa UUCUCUCU m8a Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6833-3p gaaGAGAGAAAgaaa UUUCUCUC m8a Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6817-3p gaAGAGAGAaagaaa UCUCUCUG m7a (m7a->m6a) HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6809-3p gaagAGAGAAagaaa CUUCUCUU m6b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-3675-3p gaAGAGATaaagaaa CAUCUCUA m6b Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-4768-5p gaaGAGAGAAagaaa AUUCUCUC m7b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136

Mutation Mutation ID Sample Name Cancer Type
chr12:g.292930G>A COSM2065407 HCT15 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6809-3p aaaagaAAGAGAAGg CUUCUCUU m8a Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6868-3p aaaAGAAGGAgaagg UUCCUUCU m7b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-942-5p aaaagaaAGAGAAGg UCUUCUCU m7b Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-4753-3p aaaagAAAGAGAAgg UUCUCUUU m8a Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6809-3p aaaagaAAGAGAAGg CUUCUCUU m8a Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-4279 aaaagaAGGAGAagg CUCUCCUC m6b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-130b-5p aaaaGAAAGAGaagg ACUCUUUC m7b Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-1248 aaAAGAAGGagaagg ACCUUCUU m7b (m7b->m6b) HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-4753-3p aaaagAAAGAGAAgg UUCUCUUU m8a Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-4279 aaaagaAGGAGAagg CUCUCCUC m6b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-130b-5p aaaaGAAAGAGaagg ACUCUUUC m7b Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-1248 aaAAGAAGGagaagg ACCUUCUU m7b (m7b->m6b) HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-942-5p aaaagaaAGAGAAGg UCUUCUCU m7b Created HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136
hsa-miR-6868-3p aaaAGAAGGAgaagg UUCCUUCU m7b Disrupted HHHNE_9213_KDM5A|NM_001042603|exon_CDS|-6.61775980787037|1.27917068339136

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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