SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042549
Gene Symbol: NSL1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.212737747C>T COSN1429618 RK126_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3138 tttccTGTCCACAct UGUGGACA m8a Created HPRT3_2850_G3728.1_212911072
hsa-miR-3911 tttcctgTCCACACt UGUGUGGA m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4265 tttcctGCCCACAct CUGUGGGC m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4296 tttcctGCCCACAct AUGUGGGC m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4322 tttcctGCCCACAct CUGUGGGC m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4417 tttcctGCCCACact GGUGGGCU m6b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4520-3p tttcCTGTCCAcact UUGGACAG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4800-5p tttcctGTCCACact AGUGGACC m6b Created HPRT3_2850_G3728.1_212911072
hsa-miR-6721-5p tttCCTGCCCAcact UGGGCAGG m8a Disrupted HPRT3_2850_G3728.1_212911072

Mutation Mutation ID Sample Name Cancer Type
chr1:g.212737744A>C COSN7201545 8062308 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1237-5p cctGCCCCCactcac CGGGGGCG m6b Created HPRT3_2850_G3728.1_212911072
hsa-miR-1238-5p cctgcccCCACTCAc GUGAGUGG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-1296-3p cctgcCCCCACTCac GAGUGGGG m8a Created HPRT3_2850_G3728.1_212911072
hsa-miR-4265 cctGCCCACActcac CUGUGGGC m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4296 cctGCCCACActcac AUGUGGGC m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4322 cctGCCCACActcac CUGUGGGC m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4417 cctGCCCACactcac GGUGGGCU m6b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4447 cctgCCCCCACtcac GGUGGGGG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4472 cctgCCCCCACtcac GGUGGGGG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4481 cctgccCCCACTCac GGAGUGGG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4488 cctGCCCCCactcac AGGGGGCG m6b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4658 cctgcccACACTCAc GUGAGUGU m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4697-5p cctGCCCCCactcac AGGGGGCG m6b Created HPRT3_2850_G3728.1_212911072
hsa-miR-4745-5p cctgccCCCACTCAc UGAGUGGG m8a Created HPRT3_2850_G3728.1_212911072
hsa-miR-4758-5p cctgcccCCACTCAc GUGAGUGG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-486-3p cCTGCCCCcactcac CGGGGCAG m7b Created HPRT3_2850_G3728.1_212911072
hsa-miR-574-5p cctgccCACACTCAc UGAGUGUG m8a Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-6721-5p CCTGCCCAcactcac UGGGCAGG m8a Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-6790-5p cctgcccACACTCAc GUGAGUGU m7b Disrupted HPRT3_2850_G3728.1_212911072

Mutation Mutation ID Sample Name Cancer Type
chr1:g.212737738A>G COSN5364905 RK298_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3174 cacACTCACTttttt UAGUGAGU m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-3609 cacacTCACTTTttt CAAAGUGA m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-4658 cACACTCACtttttt GUGAGUGU m8a (m8a->m7a) HPRT3_2850_G3728.1_212911072
hsa-miR-548ah-5p cacacTCACTTTTtt AAAAGUGA m8a Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-548az-5p cacactCACTTTTtt CAAAAGUG m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-548t-5p cacactCACTTTTtt CAAAAGUG m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-574-5p CACACTCActttttt UGAGUGUG m8a Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-6790-5p cACACTCACtttttt GUGAGUGU m8a (m8a->m7a) HPRT3_2850_G3728.1_212911072

Mutation Mutation ID Sample Name Cancer Type
chr1:g.212737736T>C COSN9058541 C0014T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3174 cACTCACTtttttct UAGUGAGU m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-3609 cacTCACTTTtttct CAAAGUGA m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-548ah-5p cacTCACTTTTttct AAAAGUGA m8a Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-548az-5p cactCACTTTTttct CAAAAGUG m7b Disrupted HPRT3_2850_G3728.1_212911072
hsa-miR-548t-5p cactCACTTTTttct CAAAAGUG m7b Disrupted HPRT3_2850_G3728.1_212911072

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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