SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042549
Gene Symbol: NSL1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.212770838G>C COSN14951713 LP6005409-DNA_E01 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-936 tgaTCTACTGggact ACAGUAGA m7b Created HPHES_869_G1140.1_212944192
hsa-miR-4433a-5p tgatctaGTGGGACt CGUCCCAC m7b Disrupted HPHES_869_G1140.1_212944192
hsa-miR-4301 tgatcTAGTGGGAct UCCCACUA m8a Disrupted HPHES_869_G1140.1_212944192
hsa-miR-3156-3p tgatctAGTGGGAct CUCCCACU m7b Disrupted HPHES_869_G1140.1_212944192
hsa-miR-28-3p tgATCTAGTGggact CACUAGAU m8a Disrupted HPHES_869_G1140.1_212944192

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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