| SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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| Transcript ID: | NM_001042549 |
|---|---|
| Gene Symbol: | NSL1 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.212738494A>G | COSM3746776 | CHC205T | [liver][NS][carcinoma][hepatocellular_carcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-7153-3p | ctctgaCATGGTact | CACCAUGG | m6b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.212738486G>A | COSM1295848 | TCGA-GV-A3JX-01 | [urinary_tract][bladder][carcinoma][NS] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-222-5p | tggTACTGAaaagaa | CUCAGUAG | m6b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-30a-3p | tggtACTGAAAagaa | CUUUCAGU | m7b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-30d-3p | tggtACTGAAAagaa | CUUUCAGU | m7b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-30e-3p | tggtACTGAAAagaa | CUUUCAGU | m7b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-624-5p | TGGTACTAaaaagaa | UAGUACCA | m8a | Created | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-627-3p | tggtactGAAAAGAa | UCUUUUCU | m7a | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.212738482A>G | COSM425257 | DLD1 | [large_intestine][NS][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-3124-3p | actgaaAGGAAAGca | ACUUUCCU | m7b | Created | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-3160-5p | actgaaaAGAAAGCa | GGCUUUCU | m7b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-627-3p | actGAAAAGAaagca | UCUUUUCU | m7a | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| Mutation | Mutation ID | Sample Name | Cancer Type | ||
|---|---|---|---|---|---|
| chr1:g.212738481G>AG | COSM4708365 | T407 | [large_intestine][colon][carcinoma][adenocarcinoma] | ||
| miRNA Targets Table | |||||
| miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
| hsa-miR-627-3p | ctGAAAAGAaagcaa | UCUUUUCU | m7a | (m7a->m6a) | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-335-3p | cTGAAAAAgaaagcaa | UUUUUCAU | m7a | Created | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |
| hsa-miR-3160-5p | ctgaaaAGAAAGCaa | GGCUUUCU | m7b | Disrupted | HHHNA_2451_NSL1|NM_015471|exon_CDS|-6.04557159428596|0.556064692969206 |