SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042529
Gene Symbol: COASY
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.42563068C>T COSM472820 TCGA-CZ-5465-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-3p ctggcctTGGTGCTg UAGCACCA m7b Created HPKMA_6205_G7209.1_40715086
hsa-miR-29b-3p ctggcctTGGTGCTg UAGCACCA m7b Created HPKMA_6205_G7209.1_40715086
hsa-miR-29c-3p ctggcctTGGTGCTg UAGCACCA m7b Created HPKMA_6205_G7209.1_40715086
hsa-miR-3922-5p ctGGCCTTGgtgctg UCAAGGCC m7b (m6b->m7b) HPKMA_6205_G7209.1_40715086
hsa-miR-4753-5p cTGGCCTTGgtgctg CAAGGCCA m8a (m7a->m8a) HPKMA_6205_G7209.1_40715086

Mutation Mutation ID Sample Name Cancer Type
chr17:g.42563063G>C COSM4923812 TCGA-CC-A7IH-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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