SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions
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Prediction criteria:	TargetScan sites only     All 6mer or longer seed matches

Transcript ID:	NM_001042529
Gene Symbol:	COASY
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Somatic mutations that impact miRNA target sites

Mutation		Mutation ID	Sample Name	Cancer Type
chr17:g.42563089A>G		COSM1383390	TCGA-CA-6717-01	[large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-1260a	tccgattGTGGGATa	AUCCCACC	m7a	Created	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-1260b	tccgattGTGGGATa	AUCCCACC	m7a	Created	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-188-3p	tccgatTGTGGGAta	CUCCCACA	m7b	Created	HHRBL_6385_BCBL1-2of3-SCL_12251

Mutation		Mutation ID	Sample Name	Cancer Type
chr17:g.42563068C>T		COSM472820	TCGA-CZ-5465-01	[kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-29a-3p	ctggcctTGGTGCTg	UAGCACCA	m7b	Created	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-29b-3p	ctggcctTGGTGCTg	UAGCACCA	m7b	Created	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-29c-3p	ctggcctTGGTGCTg	UAGCACCA	m7b	Created	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-3922-5p	ctGGCCTTGgtgctg	UCAAGGCC	m7b	(m6b->m7b)	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-4753-5p	cTGGCCTTGgtgctg	CAAGGCCA	m8a	(m7a->m8a)	HHRBL_6385_BCBL1-2of3-SCL_12251

Mutation		Mutation ID	Sample Name	Cancer Type
chr17:g.42563063G>C		COSM4923811	TCGA-CC-A7IH-01	[liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr17:g.42563046AGCT>A		COSM1479594	TCGA-E2-A1L6-01	[breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-1537-5p	ctgTTACAGCTgttgtcc	AGCUGUAA	m8a	Disrupted	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-194-5p	CTGTTACAgctgttgtcc	UGUAACAG	m8a	Disrupted	HHRBL_6385_BCBL1-2of3-SCL_12251
hsa-miR-549a	ctgttacAGTTGTCc	UGACAACU	m7b	Created	HHRBL_6385_BCBL1-2of3-SCL_12251

Mutation		Mutation ID	Sample Name	Cancer Type
chr17:g.42562836T>G		COSM1743048	CHOL37	[biliary_tract][bile_duct][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Mutation		Mutation ID	Sample Name	Cancer Type
chr17:g.42562815C>A		COSM979527	TCGA-B5-A0JY-01	[endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID	miRSite	miRSeed	SeedClass	FuncClass	Cluster ID
hsa-miR-548b-3p	tgaGGTTCTTGattt	CAAGAACC	m8a	Disrupted	HHRBL_6384_BCBL1-2of3-SCL_5558

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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