SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001042450
Gene Symbol: SLC5A10

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr17:g.18977897T>C COSM3787281 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6835-5p gtaACCCCCagtgac AGGGGGUA m6b Created HPTA3_8278_G13057.1_18881200
hsa-miR-6803-5p gtaACCCCCAGtgac CUGGGGGU m8a Created HPTA3_8278_G13057.1_18881200
hsa-miR-6752-5p gtaACCCCCagtgac GGGGGGUG m6b Created HPTA3_8278_G13057.1_18881200
hsa-miR-6751-5p gtaACCCCCAgtgac UUGGGGGU m7b Created HPTA3_8278_G13057.1_18881200
hsa-miR-653-3p gtaacccCCAGTGAc UUCACUGG m7b Created HPTA3_8278_G13057.1_18881200
hsa-miR-637 gtaaCCCCCAGTgac ACUGGGGG m8a Created HPTA3_8278_G13057.1_18881200
hsa-miR-4420 gtaacccTCAGTGAc GUCACUGA m7b Disrupted HPTA3_8278_G13057.1_18881200
hsa-miR-296-3p gtAACCCTCagtgac GAGGGUUG m7a (m7a->m6a) HPTA3_8278_G13057.1_18881200
hsa-miR-181b-3p gtaacccTCAGTGAc CUCACUGA m7b Disrupted HPTA3_8278_G13057.1_18881200
hsa-miR-181b-2-3p gtaacccTCAGTGAc CUCACUGA m7b Disrupted HPTA3_8278_G13057.1_18881200

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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