SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042422
Gene Symbol: SLC16A3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.82238962G>A COSM137130 cSCCP6 [skin][scalp][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4497 cacCCCGGAaacaag CUCCGGGA m6b Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-4664-3p caccCCGGAAacaag CUUCCGGU m6b Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504

Mutation Mutation ID Sample Name Cancer Type
chr17:g.82238961G>A COSM3523813 TCGA-D3-A1Q8-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4497 acacCCCGGAaacaa CUCCGGGA m6b Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-4700-5p acaCCCCAGAaacaa UCUGGGGA m7a Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-4667-5p acaCCCCAGaaacaa ACUGGGGA m6b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-4664-3p acaccCCGGAAacaa CUUCCGGU m6b Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-4314 acacCCCAGAaacaa CUCUGGGA m6b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-6819-5p aCACCCCAgaaacaa UUGGGGUG m7b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-8089 acaCCCCAGaaacaa CCUGGGGA m6b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-7155-5p acACCCCAGAaacaa UCUGGGGU m8a Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-637 acaCCCCAGaaacaa ACUGGGGG m6b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-6812-5p aCACCCCAgaaacaa AUGGGGUG m7b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-6784-5p acaCCCCGGaaacaa GCCGGGGC m6b Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-6737-5p aCACCCCAgaaacaa UUGGGGUG m7b Created HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-3170 acACCCCAGaaacaa CUGGGGUU m7a (m6a->m7a) HHRBL_6850_BCBL1-2of3-SCL_9504

Mutation Mutation ID Sample Name Cancer Type
chr17:g.82238916C>T COSM3523812 TCGA-D3-A2JD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5093 agCATTTCCTgaagg AGGAAAUG m8a Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504
hsa-miR-873-5p agcatTTCCTGaagg GCAGGAAC m6b Disrupted HHRBL_6850_BCBL1-2of3-SCL_9504

Mutation Mutation ID Sample Name Cancer Type
chr17:g.82238779AT>A COSM1287960 NB-1112 [autonomic_ganglia][NS][neuroblastoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p ctccctgATTTTGCTg AGCAAAAU m8a Disrupted HHRBL_6849_BCBL1-2of3-SCL_10636
hsa-miR-4270 CTCCCTGAttttgctg UCAGGGAG m8a Disrupted HHRBL_6849_BCBL1-2of3-SCL_10636
hsa-miR-8063 ctccctGATTTTGctg UCAAAAUC m7b Disrupted HHRBL_6849_BCBL1-2of3-SCL_10636

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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