SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042412
Gene Symbol: CYLD
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.50782434C>T COSM1378229 TCGA-CK-5912-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2054 gtcATTACAattctt CUGUAAUA m6b Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-219a-2-3p gtcattACAATTCTt AGAAUUGU m8a Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-374b-5p gtcATTATAattctt AUAUAAUA m6b Created HPRT3_9993_G13169.1_50816342

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50782434C>A COSM43399 1352690 [skin][NS][adnexal_tumour][spiradenocylindroma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2054 gtcATTACAattctt CUGUAAUA m6b Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-219a-2-3p gtcattACAATTCTt AGAAUUGU m8a Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-590-3p gtcatTAAAATTctt UAAUUUUA m7b Created HPRT3_9993_G13169.1_50816342

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50782433A>T COSM1378228 TCGA-G4-6626-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-203a-3p ggtCATTTCAattct GUGAAAUG m7b Created HPRT3_9993_G13169.1_50816342
hsa-miR-2054 ggtcATTACAattct CUGUAAUA m6b Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-219a-2-3p ggtcattACAATTCt AGAAUUGU m7b Disrupted HPRT3_9993_G13169.1_50816342

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50782427G>A COSM435363 TCGA-AR-A1AY-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4308 aTCCAGGGtcattac UCCCUGGA m7b Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-4725-5p atcCAGGGTCattac AGACCCUG m7b Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-504-5p atcCAGGGTCattac AGACCCUG m7b Disrupted HPRT3_9993_G13169.1_50816342

Mutation Mutation ID Sample Name Cancer Type
chr16:g.50782418G>A COSM558063 TCGA-05-4405-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-511-5p aagAAAGACAtccag GUGUCUUU m7b Created HPRT3_9993_G13169.1_50816342
hsa-miR-532-5p aagaAAGGCATccag CAUGCCUU m7b Disrupted HPRT3_9993_G13169.1_50816342
hsa-miR-6830-3p aaGAAAGACAtccag UGUCUUUC m8a Created HPRT3_9993_G13169.1_50816342

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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