SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001042369
Gene Symbol: TROVE2
Browse Pathways

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr1:g.193091678C>T COSM4026315 TCGA-HU-A4H4-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-580-5p aataAATCATTttag UAAUGAUU m7b Disrupted HPRT3_1159_G1560.1_193060815
hsa-miR-5692a aataaATTATTTtag CAAAUAAU m7b Created HPRT3_1159_G1560.1_193060815
hsa-miR-3662 aataaaTCATTTTag GAAAAUGA m7b Disrupted HPRT3_1159_G1560.1_193060815
hsa-miR-3646 aataaaTCATTTTag AAAAUGAA m7a Disrupted HPRT3_1159_G1560.1_193060815
hsa-miR-32-3p aaTAAATTattttag CAAUUUAG m6b Created HPRT3_1159_G1560.1_193060815

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser