SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042368
Gene Symbol: RALGDS
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.133102014C>T COSM4650826 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4537 cactcggTCGGCTCc UGAGCCGA m7b Created HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-6850-3p cactCGGCCGGctcc CCCGGCCG m7b Disrupted HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-4537 cactcggTCGGCTCc UGAGCCGA m7b Created HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-6850-3p cactCGGCCGGctcc CCCGGCCG m7b Disrupted HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-4537 cactcggTCGGCTCc UGAGCCGA m7b Created HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-6850-3p cactCGGCCGGctcc CCCGGCCG m7b Disrupted HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-4537 cactcggTCGGCTCc UGAGCCGA m7b Created HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787
hsa-miR-6850-3p cactCGGCCGGctcc CCCGGCCG m7b Disrupted HHHNE_15006_RALGDS|NM_001042368|exon_CDS|-5.77449705615307|0.738391824311787

Mutation Mutation ID Sample Name Cancer Type
chr9:g.133098692C>G COSM4418889 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNE_15004_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484

Mutation Mutation ID Sample Name Cancer Type
chr9:g.133098676A>G COSM4644908 LIM2551 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNE_15003_RALGDS|NM_001042368|exon_CDS|-5.14356617621431|1.5586774366484

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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