SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001042368
Gene Symbol: RALGDS
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.133098713C>T COSM4418100 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-5p actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34c-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449a actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449b-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4730 actctaCCGCCAact CUGGCGGA m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-548au-3p actctACTGCCAact UGGCAGUU m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6770-3p actctaCCGCCAact CUGGCGGC m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-7150 actctaCTGCCAact CUGGCAGG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-936 acTCTACTGccaact ACAGUAGA m7b (m6b->m7b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34a-5p actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34c-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449a actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449b-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4730 actctaCCGCCAact CUGGCGGA m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-548au-3p actctACTGCCAact UGGCAGUU m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6770-3p actctaCCGCCAact CUGGCGGC m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-7150 actctaCTGCCAact CUGGCAGG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-936 acTCTACTGccaact ACAGUAGA m7b (m6b->m7b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34a-5p actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34c-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449a actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449b-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4730 actctaCCGCCAact CUGGCGGA m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-548au-3p actctACTGCCAact UGGCAGUU m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6770-3p actctaCCGCCAact CUGGCGGC m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-7150 actctaCTGCCAact CUGGCAGG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-936 acTCTACTGccaact ACAGUAGA m7b (m6b->m7b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34a-5p actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-34c-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449a actctACTGCCAact UGGCAGUG m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-449b-5p actctACTGCCaact AGGCAGUG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4730 actctaCCGCCAact CUGGCGGA m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-548au-3p actctACTGCCAact UGGCAGUU m7a Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6770-3p actctaCCGCCAact CUGGCGGC m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-7150 actctaCTGCCAact CUGGCAGG m6b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-936 acTCTACTGccaact ACAGUAGA m7b (m6b->m7b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787

Mutation Mutation ID Sample Name Cancer Type
chr9:g.133098692C>G COSM4418889 SNUH_G76_S1 [haematopoietic_and_lymphoid_tissue][NS][haematopoietic_neoplasm][acute_myeloid_leukaemia]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-1224-5p ttGTCCTCAagaagc GUGAGGAC m7b (m7b->m6b) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4436a tTGTCCTGaagaagc GCAGGACA m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-4778-3p ttgtcctGAAGAAGc UCUUCUUC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5000-3p tTGTCCTGAagaagc UCAGGACA m8a (m7a->m8a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-5004-5p tTGTCCTCAagaagc UGAGGACA m8a (m8a->m7a) HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-526b-5p ttgtcCTCAAGAagc CUCUUGAG m7b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-6858-5p ttgTCCTCAagaagc GUGAGGAG m6b Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787

Mutation Mutation ID Sample Name Cancer Type
chr9:g.133098676A>G COSM4644908 LIM2551 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-212-5p gaccttcGCCAAGGg ACCUUGGC m7b Created HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787
hsa-miR-493-3p GACCTTCAccaaggg UGAAGGUC m8a Disrupted HHHNA_22518_RALGDS|NM_001042368|exon_CDS|-4.59212133996392|1.64053222349787

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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