SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040437
Gene Symbol: C6orf48

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.31837107G>C COSN8892459 B80-Tumor [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6871-5p agtCTCCCATGctgg CAUGGGAG m8a Created HPHES_7038_G9376.1_31804879
hsa-miR-6788-5p agTCTCCCAtgctgg CUGGGAGA m7b (m6b->m7b) HPHES_7038_G9376.1_31804879
hsa-miR-5739 agTCTCCGatgctgg GCGGAGAG m6b Disrupted HPHES_7038_G9376.1_31804879
hsa-miR-5091 aGTCTCCGatgctgg ACGGAGAC m7b Disrupted HPHES_7038_G9376.1_31804879
hsa-miR-30c-2-3p agTCTCCCAtgctgg CUGGGAGA m7b (m6b->m7b) HPHES_7038_G9376.1_31804879
hsa-miR-30c-1-3p agTCTCCCAtgctgg CUGGGAGA m7b (m6b->m7b) HPHES_7038_G9376.1_31804879

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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