SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001040428 |
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Gene Symbol: | SPATA7 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr14:g.88416826T>G | COSM958435 | TCGA-AP-A0LM-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3609 | agTCACTTTttaata | CAAAGUGA | m7b | (m7b->m6b) | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-5190 | aGTCACTGtttaata | CCAGUGAC | m7b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-548ah-5p | agTCACTTTTtaata | AAAAGUGA | m8a | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-548az-5p | agtCACTTTTtaata | CAAAAGUG | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-548t-5p | agtCACTTTTtaata | CAAAAGUG | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr14:g.88416804A>G | COSM3793910 | TCGA-BT-A3PK-01 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-2681-5p | gccaattGTAAAAat | GUUUUACC | m6b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-374a-5p | gccaATTATAAaaat | UUAUAAUA | m7a | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-374b-5p | gccaATTATAaaaat | AUAUAAUA | m6b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-7849-3p | gcCAATTGTaaaaat | GACAAUUG | m7b | (m6b->m7b) | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr14:g.88416797G>A | COSM1749011 | B83 | [urinary_tract][bladder][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-218-1-3p | aatgcGAACCAatta | AUGGUUCC | m6b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-659-3p | aatgcGAACCAAtta | CUUGGUUC | m7b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6814-3p | aATGCGAGccaatta | ACUCGCAU | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6872-5p | aATGCGAGccaatta | UCUCGCAU | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-8057 | aatgcGAGCCAatta | GUGGCUCU | m6b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr14:g.88416795G>T | COSM1707673 | YUWAND | [skin][mucosal][malignant_melanoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-1179 | gcAATGCTagccaat | AAGCAUUC | m6b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6069 | gcaatgCTAGCCaat | GGGCUAGG | m6b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-621 | gcaaTGCTAGCCaat | GGCUAGCA | m8a | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6814-3p | gcaATGCGAGccaat | ACUCGCAU | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6872-5p | gcaATGCGAGccaat | UCUCGCAU | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-8057 | gcaatgcGAGCCAat | GUGGCUCU | m6b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr14:g.88416795G>A | COSM958434 | TCGA-AP-A056-01 | [endometrium][NS][carcinoma][endometrioid_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-33a-5p | gCAATGCAagccaat | GUGCAUUG | m7b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-33b-5p | gCAATGCAagccaat | GUGCAUUG | m7b | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-4327 | gcaaTGCAAGCCaat | GGCUUGCA | m8a | Created | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6814-3p | gcaATGCGAGccaat | ACUCGCAU | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-6872-5p | gcaATGCGAGccaat | UCUCGCAU | m7b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |
hsa-miR-8057 | gcaatgcGAGCCAat | GUGGCUCU | m6b | Disrupted | HHKTB_2246_NM_018418|475|514|39.3664895865275|0.195186763058256 |