SomamiR DB 2.0 Somatic mutations altering microRNA-ceRNA interactions |
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Transcript ID: | NM_001040284 |
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Gene Symbol: | PAPD5 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
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chr16:g.50225230C>T | COSM1378166 | TCGA-AA-3663-01 | [large_intestine][caecum][carcinoma][adenocarcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4709-3p | tcaaaCTCTTCAtca | UUGAAGAG | m7b | Disrupted | HPSD3_3890_G5156.1_50259123 |
hsa-miR-561-3p | tcAAACTTTtcatca | CAAAGUUU | m7b | (m6b->m7b) | HPSD3_3890_G5156.1_50259123 |
hsa-miR-4709-3p | tcaaaCTCTTCAtca | UUGAAGAG | m7b | Disrupted | HPSD3_3890_G5156.1_50259123 |
hsa-miR-561-3p | tcAAACTTTtcatca | CAAAGUUU | m7b | (m6b->m7b) | HPSD3_3890_G5156.1_50259123 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr16:g.50225230C>G | COSM435346 | TCGA-C8-A12Z-01 | [breast][NS][carcinoma][NS] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-4709-3p | tcaaaCTCTTCAtca | UUGAAGAG | m7b | Disrupted | HPSD3_3890_G5156.1_50259123 |
hsa-miR-4709-3p | tcaaaCTCTTCAtca | UUGAAGAG | m7b | Disrupted | HPSD3_3890_G5156.1_50259123 |
Mutation | Mutation ID | Sample Name | Cancer Type | ||
---|---|---|---|---|---|
chr16:g.50225229T>C | COSM4186651 | BK0027 | [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma] | ||
miRNA Targets Table | |||||
miR ID | miRSite | miRSeed | SeedClass | FuncClass | Cluster ID |
hsa-miR-3179 | ttcaaaCCCTTCatc | AGAAGGGG | m6b | Created | HPSD3_3890_G5156.1_50259123 |
hsa-miR-4709-3p | ttcaaaCTCTTCAtc | UUGAAGAG | m7b | Disrupted | HPSD3_3890_G5156.1_50259123 |
hsa-miR-6864-5p | ttcaaaCCCTTCAtc | UUGAAGGG | m7b | Created | HPSD3_3890_G5156.1_50259123 |
hsa-miR-7515 | ttcaaaCCCTTCatc | AGAAGGGA | m6b | Created | HPSD3_3890_G5156.1_50259123 |
hsa-miR-3179 | ttcaaaCCCTTCatc | AGAAGGGG | m6b | Created | HPSD3_3890_G5156.1_50259123 |
hsa-miR-4709-3p | ttcaaaCTCTTCAtc | UUGAAGAG | m7b | Disrupted | HPSD3_3890_G5156.1_50259123 |
hsa-miR-6864-5p | ttcaaaCCCTTCAtc | UUGAAGGG | m7b | Created | HPSD3_3890_G5156.1_50259123 |
hsa-miR-7515 | ttcaaaCCCTTCatc | AGAAGGGA | m6b | Created | HPSD3_3890_G5156.1_50259123 |