SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040158
Gene Symbol: H2AFY
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389107C>A COSN5069417 CCC1 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-146b-3p tccgcctACAGGGCc UGCCCUGU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3197 tcCGCCTCCagggcc GGAGGCGC m7a (m7a->m6a) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3612 tccGCCTCCagggcc AGGAGGCA m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4254 tccgcCTCCAGGgcc GCCUGGAG m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4308 tccgccTCCAGGGcc UCCCUGGA m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4443 tccGCCTCCAgggcc UUGGAGGC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6087 tCCGCCTCcagggcc UGAGGCGG m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-650 tccGCCTCCagggcc AGGAGGCA m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-146b-3p tccgcctACAGGGCc UGCCCUGU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3197 tcCGCCTCCagggcc GGAGGCGC m7a (m7a->m6a) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3612 tccGCCTCCagggcc AGGAGGCA m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4254 tccgcCTCCAGGgcc GCCUGGAG m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4308 tccgccTCCAGGGcc UCCCUGGA m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4443 tccGCCTCCAgggcc UUGGAGGC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6087 tCCGCCTCcagggcc UGAGGCGG m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-650 tccGCCTCCagggcc AGGAGGCA m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389097C>T COSN8203560 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-34a-5p gggcCACTGCCAtgt UGGCAGUG m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-34c-5p gggcCACTGCCatgt AGGCAGUG m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3677-5p gGGCCACTGccatgt CAGUGGCC m8a (m7a->m8a) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-449a gggcCACTGCCAtgt UGGCAGUG m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-449b-5p gggcCACTGCCatgt AGGCAGUG m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-5693 ggGCCACTGCcatgt GCAGUGGC m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-663b GGGCCACCgccatgt GGUGGCCC m8a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389086G>A COSM3850232 TCGA-BR-4361-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-579-5p atgtcgAACCGCGgt UCGCGGUU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-579-5p atgtcgAACCGCGgt UCGCGGUU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389085C>T COSM3696915 TCGA-AD-5900-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389084C>T COSM3850229 TCGA-HU-A4GX-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4660 gtcGAGCTGCggtgg UGCAGCUC m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4660 gtcGAGCTGCggtgg UGCAGCUC m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389081G>A COSM3138403 TCGA-BC-A10U-01 [liver][NS][carcinoma][hepatocellular_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-3p gagccgcGGTGGGaa CCCCACCU m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1260a gagccgcGGTGGGAa AUCCCACC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1260b gagccgcGGTGGGAa AUCCCACC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1273g-3p gagccGCAGTGGgaa ACCACUGC m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3156-3p gagccgcAGTGGGAa CUCCCACU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4301 gagccgcAGTGGGAa UCCCACUA m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1224-3p gagccgcGGTGGGaa CCCCACCU m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1260a gagccgcGGTGGGAa AUCCCACC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1260b gagccgcGGTGGGAa AUCCCACC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-1273g-3p gagccGCAGTGGgaa ACCACUGC m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3156-3p gagccgcAGTGGGAa CUCCCACU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4301 gagccgcAGTGGGAa UCCCACUA m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389066T>C COSM735643 TCGA-60-2725-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p gAAGAAGCccaccaa AGCUUCUU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-27a-5p gaagAAGCCCaccaa AGGGCUUA m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3165 gaagaagTCCACCaa AGGUGGAU m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4417 gaagaAGCCCACCaa GGUGGGCU m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-5009-5p gaagAAGTCCAccaa UUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-541-3p gaagaaGCCCACCAa UGGUGGGC m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6505-3p gaAGAAGTCcaccaa UGACUUCU m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-654-5p gaagaaGCCCACCAa UGGUGGGC m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6769a-5p gaagaagCCCACCaa AGGUGGGU m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6769b-5p gaagaagCCCACCAa UGGUGGGU m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6815-3p gaAGAAGCCcaccaa UGGCUUCU m7b (m6b->m7b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6880-5p gaagaagTCCACCAa UGGUGGAG m7a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8058 gaagAAGTCCAccaa CUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8071 gaagaaGTCCACCaa CGGUGGAC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-92a-2-5p gaagaagCCCACCaa GGGUGGGG m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-103a-2-5p gAAGAAGCccaccaa AGCUUCUU m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-27a-5p gaagAAGCCCaccaa AGGGCUUA m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3165 gaagaagTCCACCaa AGGUGGAU m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4417 gaagaAGCCCACCaa GGUGGGCU m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-5009-5p gaagAAGTCCAccaa UUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-541-3p gaagaaGCCCACCAa UGGUGGGC m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6505-3p gaAGAAGTCcaccaa UGACUUCU m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-654-5p gaagaaGCCCACCAa UGGUGGGC m8a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6769a-5p gaagaagCCCACCaa AGGUGGGU m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6769b-5p gaagaagCCCACCAa UGGUGGGU m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6815-3p gaAGAAGCCcaccaa UGGCUUCU m7b (m6b->m7b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6880-5p gaagaagTCCACCAa UGGUGGAG m7a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8058 gaagAAGTCCAccaa CUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8071 gaagaaGTCCACCaa CGGUGGAC m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-92a-2-5p gaagaagCCCACCaa GGGUGGGG m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389066AAGT>T COSM1642594 pfg019T [stomach][NS][adenocarcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3165 gaagaagTCCACCaa AGGUGGAU m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4659a-3p gaAGAAGAAgtccaccaa UUUCUUCU m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4659b-3p gaAGAAGAAgtccaccaa UUUCUUCU m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4778-3p GAAGAAGAagtccaccaa UCUUCUUC m8a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-5009-5p gaagaagAAGTCCAccaa UUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6505-3p gaagaAGAAGTCcaccaa UGACUUCU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8058 gaagaagAAGTCCAccaa CUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8071 gaagaaGTCCACCaa CGGUGGAC m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3165 gaagaagTCCACCaa AGGUGGAU m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4659a-3p gaAGAAGAAgtccaccaa UUUCUUCU m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4659b-3p gaAGAAGAAgtccaccaa UUUCUUCU m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4778-3p GAAGAAGAagtccaccaa UCUUCUUC m8a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-5009-5p gaagaagAAGTCCAccaa UUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6505-3p gaagaAGAAGTCcaccaa UGACUUCU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8058 gaagaagAAGTCCAccaa CUGGACUU m7b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8071 gaagaaGTCCACCaa CGGUGGAC m7b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

Mutation Mutation ID Sample Name Cancer Type
chr5:g.135389062C>T COSM3918645 TCGA-BF-A3DM-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3134 aagTCCATCAagacg UGAUGGAU m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3165 aagTCCACCaagacg AGGUGGAU m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4534 aagTCCATCaagacg GGAUGGAG m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6880-5p aagTCCACCAagacg UGGUGGAG m7a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8071 aaGTCCACCaagacg CGGUGGAC m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8082 aagTCCATCAagacg UGAUGGAG m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3134 aagTCCATCAagacg UGAUGGAU m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-3165 aagTCCACCaagacg AGGUGGAU m6b Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-4534 aagTCCATCaagacg GGAUGGAG m6b Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-6880-5p aagTCCACCAagacg UGGUGGAG m7a Disrupted HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8071 aaGTCCACCaagacg CGGUGGAC m7b (m7b->m6b) HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794
hsa-miR-8082 aagTCCATCAagacg UGAUGGAG m7a Created HHHNA_18158_H2AFY|NM_001040158|exon_utr5|-5.70264607104918|-0.645714690814794

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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