SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001040025
Gene Symbol: ARL16

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.81682058C>T COSM1630479 RK065_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-29a-3p gaagcatTGGTGCTg UAGCACCA m7b Created HHHNE_1224_ARL16|NM_001040025|exon_CDS|-4.95028365477093|-0.834582227535923
hsa-miR-29b-3p gaagcatTGGTGCTg UAGCACCA m7b Created HHHNE_1224_ARL16|NM_001040025|exon_CDS|-4.95028365477093|-0.834582227535923
hsa-miR-29c-3p gaagcatTGGTGCTg UAGCACCA m7b Created HHHNE_1224_ARL16|NM_001040025|exon_CDS|-4.95028365477093|-0.834582227535923

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser