SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039841
Gene Symbol: ARHGAP11B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.30633523A>C COSM1129244 TCGA-CH-5752-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6843-3p tagaAGACCATattc AUGGUCUC m7a Created HPRT3_8890_G11697.1_30925750
hsa-miR-6740-3p tAGAAGACcatattc UGUCUUCU m7b Created HPRT3_8890_G11697.1_30925750
hsa-miR-5583-3p tagaagaCCATATTc GAAUAUGG m7b Created HPRT3_8890_G11697.1_30925750
hsa-miR-4677-5p tagAAGAACAtattc UUGUUCUU m7b Disrupted HPRT3_8890_G11697.1_30925750
hsa-miR-4659b-3p tAGAAGAAcatattc UUUCUUCU m7b Disrupted HPRT3_8890_G11697.1_30925750
hsa-miR-4659a-3p tAGAAGAAcatattc UUUCUUCU m7b Disrupted HPRT3_8890_G11697.1_30925750
hsa-miR-22-5p taGAAGAACatattc AGUUCUUC m7b (m7b->m6b) HPRT3_8890_G11697.1_30925750
hsa-miR-2116-5p tagAAGAACatattc GGUUCUUA m6b Disrupted HPRT3_8890_G11697.1_30925750

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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