SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039659
Gene Symbol: IL18BP

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr11:g.72001843T>A COSM1356763 TCGA-AZ-6600-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1269a acagCAGTCCAcagc CUGGACUG m7b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-1269b acagCAGTCCAcagc CUGGACUG m7b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-1288-3p acaGCAGTCCAcagc UGGACUGC m8a Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-4515 acagCAGTCCacagc AGGACUGG m6b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-4527 acaGCAGACCAcagc UGGUCUGC m8a Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-4740-5p acagCAGTCCacagc AGGACUGA m6b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-4800-5p acagcaGTCCACagc AGUGGACC m6b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-6071 aCAGCAGAccacagc UUCUGCUG m7b Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-6503-5p acaGCAGACCacagc AGGUCUGC m7b Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-6848-3p acagcAGACCACagc GUGGUCUC m7a Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-7114-5p acagcagTCCACAGc UCUGUGGA m7b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832

Mutation Mutation ID Sample Name Cancer Type
chr11:g.72001839G>C COSM3722161 575 [upper_aerodigestive_tract][mouth][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1288-3p agccacaGCAGTCCa UGGACUGC m7b Disrupted HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-3650 agcCACACCagtcca AGGUGUGU m6b Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-4515 agccacaCCAGTCCa AGGACUGG m7b Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-644a aGCCACACcagtcca AGUGUGGC m7b Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832
hsa-miR-7978 agccACACCAGtcca UCUGGUGU m7b Created HHHNA_4757_IL18BP|NM_001145055|exon_CDS|-3.65889519253899|0.27086646834832

Mutation Mutation ID Sample Name Cancer Type
chr11:g.72001488TCTC>T COSM4692223 T2944 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4434 accaaCTTCTCCTgtgtg AGGAGAAG m8a Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-4516 accaaCTTCTCCtgtgtg GGGAGAAG m7b Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-4768-3p accaactTCTCCTGtgtg CCAGGAGA m7b Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-5703 accaaCTTCTCCTgtgtg AGGAGAAG m8a Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238

Mutation Mutation ID Sample Name Cancer Type
chr11:g.72001477C>T COSM931618 TCGA-D1-A174-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-143-5p ccCTGCACagcacca GGUGCAGU m6b Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-31-3p ccctGCATAGCAcca UGCUAUGC m8a Created HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-6811-5p cCCTGCATagcacca AUGCAGGC m7a Created HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238

Mutation Mutation ID Sample Name Cancer Type
chr11:g.72001474G>A COSM1475870 TCGA-AO-A1KT-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-135b-3p ctgCCCTACAcagca AUGUAGGG m7b Created HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-143-5p ctgccCTGCACagca GGUGCAGU m6b Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-1909-3p ctgCCCTGCacagca CGCAGGGG m6b Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-4436b-3p CTGCCCTGcacagca CAGGGCAG m8a Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-6132 ctGCCCTGCacagca AGCAGGGC m7b (m7b->m6b) HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-6735-5p CTGCCCTGcacagca CAGGGCAG m8a Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-6836-5p ctGCCCTGCacagca CGCAGGGC m7b (m7b->m6b) HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238
hsa-miR-6879-5p CTGCCCTGcacagca CAGGGCAG m8a Disrupted HHHNA_4755_IL18BP|NM_173042|exon_CDS|-3.04119111854547|0.906813369118238

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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