SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039614
Gene Symbol: C15orf59

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr15:g.73740184C>T COSM4822246 TCGA-EA-A50E-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6511a-3p agggggaTGGTGAGc CCUCACCA m7b Created HHHNH_435_C15orf59|NM_001039614|exon_CDS|-1.29305315805732|-0.499576850178168
hsa-miR-6511b-3p agggggaTGGTGAGc CCUCACCA m7b Created HHHNH_435_C15orf59|NM_001039614|exon_CDS|-1.29305315805732|-0.499576850178168
hsa-miR-6729-3p agGGGGATGgtgagc UCAUCCCC m7b (m6b->m7b) HHHNH_435_C15orf59|NM_001039614|exon_CDS|-1.29305315805732|-0.499576850178168

Mutation Mutation ID Sample Name Cancer Type
chr15:g.73740183G>T COSM556007 TCGA-38-4625-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-27a-3p gggggACTGTGAgca UUCACAGU m7b Created HHHNH_435_C15orf59|NM_001039614|exon_CDS|-1.29305315805732|-0.499576850178168
hsa-miR-27b-3p gggggACTGTGAgca UUCACAGU m7b Created HHHNH_435_C15orf59|NM_001039614|exon_CDS|-1.29305315805732|-0.499576850178168
hsa-miR-3681-3p gggggACTGTGagca ACACAGUG m6b Created HHHNH_435_C15orf59|NM_001039614|exon_CDS|-1.29305315805732|-0.499576850178168

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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