SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039577
Gene Symbol: CCNL2

Somatic mutations that impact miRNA target sites

Mutation Mutation ID Sample Name Cancer Type
chr1:g.1399181C>T COSM400395 LUAD-2GUGK [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr1:g.1399173GT>T COSM4670256 T3152 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3663-3p ctccggGGTGCTCAtc UGAGCACC m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6871-3p ctccgGGGTGCTcatc CAGCACCC m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-3663-3p ctccggGGTGCTCAtc UGAGCACC m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6871-3p ctccgGGGTGCTcatc CAGCACCC m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755

Mutation Mutation ID Sample Name Cancer Type
chr1:g.1399172G>A COSM79613 TCGA-24-2262-01 [ovary][NS][carcinoma][serous_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1911-5p ccggGGTACTCAtca UGAGUACC m8a Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-3663-3p ccggGGTGCTCAtca UGAGCACC m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-556-5p ccggggtGCTCATCa GAUGAGCU m7a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6871-3p ccgGGGTGCTcatca CAGCACCC m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755

Mutation Mutation ID Sample Name Cancer Type
chr1:g.1399157G>T COSM894975 TCGA-B5-A0JY-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-101-5p ccttgGATAACTGcc CAGUUAUC m8a Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4277 ccttggAGAACTGCc GCAGUUCU m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-515-5p ccTTGGAGAActgcc UUCUCCAA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-519d-5p ccTTGGAGaactgcc CCUCCAAA m6b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-519e-5p ccTTGGAGAActgcc UUCUCCAA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-5695 cCTTGGAGaactgcc ACUCCAAG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-101-5p ccttgGATAACTGcc CAGUUAUC m8a Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4277 ccttggAGAACTGCc GCAGUUCU m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-515-5p ccTTGGAGAActgcc UUCUCCAA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-519d-5p ccTTGGAGaactgcc CCUCCAAA m6b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-519e-5p ccTTGGAGAActgcc UUCUCCAA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-5695 cCTTGGAGaactgcc ACUCCAAG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755

Mutation Mutation ID Sample Name Cancer Type
chr1:g.1399148C>T COSM4439831 Patient_1:_post-everolimus [thyroid][NS][carcinoma][anaplastic_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1827 aCTGCCTCctgcctg UGAGGCAG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-298 actgcCTTCTGCctg AGCAGAAG m7b Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-3612 acTGCCTCCTgcctg AGGAGGCA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-3714 aCTGCCTTCtgcctg GAAGGCAG m8a (m7a->m8a) HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4459 actgCCTCCTGcctg CCAGGAGG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4695-5p actGCCTCCTGcctg CAGGAGGC m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4722-5p actgcCTCCTGCCtg GGCAGGAG m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-605-3p acTGCCTTCTgcctg AGAAGGCA m8a Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-650 acTGCCTCCTgcctg AGGAGGCA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6511a-5p actgcctTCTGCCTg CAGGCAGA m7b Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6808-5p actgcctCCTGCCTg CAGGCAGG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6893-5p actgcctCCTGCCTg CAGGCAGG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-1827 aCTGCCTCctgcctg UGAGGCAG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-298 actgcCTTCTGCctg AGCAGAAG m7b Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-3612 acTGCCTCCTgcctg AGGAGGCA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-3714 aCTGCCTTCtgcctg GAAGGCAG m8a (m7a->m8a) HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4459 actgCCTCCTGcctg CCAGGAGG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4695-5p actGCCTCCTGcctg CAGGAGGC m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-4722-5p actgcCTCCTGCCtg GGCAGGAG m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-605-3p acTGCCTTCTgcctg AGAAGGCA m8a Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-650 acTGCCTCCTgcctg AGGAGGCA m8a Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6511a-5p actgcctTCTGCCTg CAGGCAGA m7b Created HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6808-5p actgcctCCTGCCTg CAGGCAGG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755
hsa-miR-6893-5p actgcctCCTGCCTg CAGGCAGG m7b Disrupted HHHNA_88_CCNL2|NM_030937|exon_CDS|-5.21718314955275|-0.311381716222755

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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