SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
  Home Search Help Download  

PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039395
Gene Symbol: SPATA6L

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr9:g.4662890C>T COSM3657637 TCGA-EE-A3AD-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6836-5p ctcttcGCCCTGCtg CGCAGGGC m7b Disrupted HHHNH_2839_PPAPDC2|NM_203453|exon_CDS|-5.32903830694225|-0.742667112120162
hsa-miR-6510-5p ctcttcgCCCTGCTg CAGCAGGG m7b Disrupted HHHNH_2839_PPAPDC2|NM_203453|exon_CDS|-5.32903830694225|-0.742667112120162
hsa-miR-6165 ctcttcgTCCTGCTg CAGCAGGA m7b Created HHHNH_2839_PPAPDC2|NM_203453|exon_CDS|-5.32903830694225|-0.742667112120162
hsa-miR-6132 ctcttcGCCCTGCTg AGCAGGGC m8a Disrupted HHHNH_2839_PPAPDC2|NM_203453|exon_CDS|-5.32903830694225|-0.742667112120162
hsa-miR-1286 ctcttcGTCCTGCtg UGCAGGAC m7b Created HHHNH_2839_PPAPDC2|NM_203453|exon_CDS|-5.32903830694225|-0.742667112120162

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

Genome Browser