SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001039111
Gene Symbol: TRIM71

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.32891965T>C COSN1276042 HCC116T [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-636 agaaAAGCACAacat UGUGCUUG m7a Created HPKMA_10006_G11588.1_32933464
hsa-miR-5003-3p aGAAAAGTAcaacat UACUUUUC m8a (m8a->m7a) HPKMA_10006_G11588.1_32933464
hsa-miR-3613-5p agaaaaGTACAACAt UGUUGUAC m8a Disrupted HPKMA_10006_G11588.1_32933464
hsa-miR-3140-3p agAAAAGCacaacat AGCUUUUG m6b Created HPKMA_10006_G11588.1_32933464
hsa-miR-218-5p agaaAAGCACAAcat UUGUGCUU m8a Created HPKMA_10006_G11588.1_32933464
hsa-miR-636 agaaAAGCACAacat UGUGCUUG m7a Created HPKMA_10006_G11588.1_32933464
hsa-miR-5003-3p aGAAAAGTAcaacat UACUUUUC m8a (m8a->m7a) HPKMA_10006_G11588.1_32933464
hsa-miR-3613-5p agaaaaGTACAACAt UGUUGUAC m8a Disrupted HPKMA_10006_G11588.1_32933464
hsa-miR-218-5p agaaAAGCACAAcat UUGUGCUU m8a Created HPKMA_10006_G11588.1_32933464

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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