SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001038618
Gene Symbol: NARF

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.82481190G>A COSM986139 TCGA-D1-A174-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-33b-3p ccggGGCACTGactg CAGUGCCU m7a Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-371b-3p ccgGGGCACTgactg AAGUGCCC m7b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-4697-3p ccggggCACTGACtg UGUCAGUG m7b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651

Mutation Mutation ID Sample Name Cancer Type
chr17:g.82481184C>A COSM3672636 TCGA-HC-7080-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p tggcTCCCGGGGcgc CCCCGGGA m8a Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-210-5p tggctcCAGGGGCgc AGCCCCUG m7b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-331-3p tggctCCAGGGGCgc GCCCCUGG m8a Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-4254 tggCTCCAGGggcgc GCCUGGAG m7b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-4308 tggcTCCAGGGgcgc UCCCUGGA m7b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-505-5p TGGCTCCCggggcgc GGGAGCCA m8a Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-5587-3p tggctCCCGGGGCgc GCCCCGGG m8a Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-6827-5p tGGCTCCCggggcgc UGGGAGCC m7b Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651

Mutation Mutation ID Sample Name Cancer Type
chr17:g.82481170C>T COSM1195759 H1155 [lung][NS][carcinoma][large_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1468-3p ccccctgTTTTGCat AGCAAAAU m6b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-1909-3p cCCCCTGCtttgcat CGCAGGGG m7b Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-330-3p cccccTGCTTTGCat GCAAAGCA m8a Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-518a-5p ccccctgCTTTGCAt CUGCAAAG m7b Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-527 ccccctgCTTTGCAt CUGCAAAG m7b Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-548aw ccccctgTTTTGCAt GUGCAAAA m7b Created HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-6510-5p ccCCCTGCTttgcat CAGCAGGG m7b (m7b->m6b) HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651
hsa-miR-6722-3p cCCCCTGCtttgcat UGCAGGGG m7b Disrupted HHHNE_11926_NARF|NM_001083608|exon_CDS|-6.26751106540859|-0.989070567302651

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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