SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001037806
Gene Symbol: NCKAP5L

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796839G>A COSM3461745 TCGA-EE-A2M5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4493 cctacaGGCCTTCct AGAAGGCC m7b Disrupted HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485
hsa-miR-493-3p cctacaGACCTTCct UGAAGGUC m7b Created HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485
hsa-miR-6735-3p cctACAGGCCTtcct AGGCCUGU m8a Disrupted HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485
hsa-miR-6753-3p cctACAGACCttcct UGGUCUGU m7b Created HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485
hsa-miR-7107-3p cctACAGACCttcct UGGUCUGU m7b Created HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796833C>T COSM3461744 TCGA-EB-A431-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4476 ggCCTTCCTGgccgg CAGGAAGG m8a Disrupted HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485
hsa-miR-4493 GGCCTTCTtggccgg AGAAGGCC m8a Created HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485
hsa-miR-6876-5p ggCCTTCCTGgccgg CAGGAAGG m8a Disrupted HHHNA_5499_NCKAP5L|NM_001037806|exon_CDS|-2.50699121639452|0.336998711956485

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796582C>G COSM1289779 CLL116 [haematopoietic_and_lymphoid_tissue][NS][lymphoid_neoplasm][chronic_lymphocytic_leukaemia-small_lymphocytic_lymphoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3915 cccaTTCCTCAtctc UUGAGGAA m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3928-3p cccaTTCCTCatctc GGAGGAAC m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3915 cccaTTCCTCAtctc UUGAGGAA m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3928-3p cccaTTCCTCatctc GGAGGAAC m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796580C>G COSM4963831 ITNET_0935_T [pancreas][NS][carcinoid-endocrine_tumour][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1273f cattcctCATCTCag GGAGAUGG m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-143-3p cattccTCATCTCAg UGAGAUGA m8a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3915 caTTCCTCAtctcag UUGAGGAA m7b (m7b->m6b) HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3928-3p caTTCCTCatctcag GGAGGAAC m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4708-5p cattcctCATCTCag AGAGAUGC m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4770 cattccTCATCTCAg UGAGAUGA m8a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4772-5p cattCCTGATCtcag UGAUCAGG m7b Created HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-6088 cattccTCATCTCag AGAGAUGA m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-1273f cattcctCATCTCag GGAGAUGG m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-143-3p cattccTCATCTCAg UGAGAUGA m8a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3915 caTTCCTCAtctcag UUGAGGAA m7b (m7b->m6b) HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3928-3p caTTCCTCatctcag GGAGGAAC m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4708-5p cattcctCATCTCag AGAGAUGC m6b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4770 cattccTCATCTCAg UGAGAUGA m8a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4772-5p cattCCTGATCtcag UGAUCAGG m7b Created HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-6088 cattccTCATCTCag AGAGAUGA m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181

Mutation Mutation ID Sample Name Cancer Type
chr12:g.49796535G>T COSM940236 TCGA-BG-A0MQ-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-3p tctCCTGGGGaagct CCCCAGGG m7a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-2115-5p tctcctgTGGAAGCt AGCUUCCA m7b Created HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-2355-5p tctcCTGGGGAagct AUCCCCAG m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3692-3p tctccTGTGGAAgct GUUCCACA m7b Created HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4768-3p TCTCCTGGggaagct CCAGGAGA m8a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-665 tCTCCTGGggaagct ACCAGGAG m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-6840-3p tcTCCTGGGgaagct GCCCAGGA m7b (m7b->m6b) HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-1915-3p tctCCTGGGGaagct CCCCAGGG m7a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-2115-5p tctcctgTGGAAGCt AGCUUCCA m7b Created HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-2355-5p tctcCTGGGGAagct AUCCCCAG m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-3692-3p tctccTGTGGAAgct GUUCCACA m7b Created HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-4768-3p TCTCCTGGggaagct CCAGGAGA m8a Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-665 tCTCCTGGggaagct ACCAGGAG m7b Disrupted HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181
hsa-miR-6840-3p tcTCCTGGGgaagct GCCCAGGA m7b (m7b->m6b) HHHNA_5498_NCKAP5L|NM_001037806|exon_CDS|-1.97489475124854|0.583327479467181

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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