SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001037328
Gene Symbol: STAU1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr20:g.49114253A>C COSN5972968 RK081_C01 [liver][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-561-3p atatAAACTTTtcat CAAAGUUU m7b Created HPCB1_24996_G31677.1_47730804
hsa-miR-590-3p ataTAAAATTttcat UAAUUUUA m7b Disrupted HPCB1_24996_G31677.1_47730804
hsa-miR-4282 atataAAATTTTcat UAAAAUUU m7b Disrupted HPCB1_24996_G31677.1_47730804

Mutation Mutation ID Sample Name Cancer Type
chr20:g.49114168A>T COSN7052416
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8061 tAATCTAAccgacaa CUUAGAUU m7b Disrupted HPCB1_24995_G31676.1_47730697
hsa-miR-4760-5p tAATCTAAccgacaa UUUAGAUU m7b Disrupted HPCB1_24995_G31676.1_47730697

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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