SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001035260
Gene Symbol: VPS26A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr10:g.69133026C>T COSM4740534 T3064 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-136-5p tctatgATGGAGaat ACUCCAUU m6b Created HPCB1_5111_G6282.1_70892774
hsa-miR-3605-3p tctatgACGGAGaat CCUCCGUG m6b Disrupted HPCB1_5111_G6282.1_70892774
hsa-miR-376a-3p TCTATGATggagaat AUCAUAGA m8a Created HPCB1_5111_G6282.1_70892774
hsa-miR-376b-3p TCTATGATggagaat AUCAUAGA m8a Created HPCB1_5111_G6282.1_70892774
hsa-miR-6884-3p tctaTGATGGagaat CCCAUCAC m6b Created HPCB1_5111_G6282.1_70892774

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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