SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001034845
Gene Symbol: GALNTL6
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr4:g.173040031T>G COSM4135496 AOCS-152-1-X [ovary][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4663 ctgagaCTCAGCagt AGCUGAGC m6b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-627-5p ctgAGACTCAgcagt GUGAGUCU m7b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-8077 ctgagACTCAGCagt GGCUGAGU m7b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-924 ctgAGACTCagcagt AGAGUCUU m6b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-93-3p ctgagacTCAGCAGt ACUGCUGA m7b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584

Mutation Mutation ID Sample Name Cancer Type
chr4:g.173040024C>T COSM3775699 TCGA-FD-A3SR-01 [urinary_tract][bladder][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-371a-5p cctctcTTTGAGact ACUCAAAC m6b Created HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-371b-5p cctctcTTTGAGact ACUCAAAA m6b Created HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-372-5p cctctcTTTGAGact CCUCAAAU m6b Created HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-373-5p cctctcTTTGAGact ACUCAAAA m6b Created HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-3919 cctcTCTCTGagact GCAGAGAA m6b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-4311 ccTCTCTTTgagact GAAAGAGA m7b (m6b->m7b) HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-4330 cctctcTCTGAGact CCUCAGAU m6b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-4756-3p cctcTCTCTGagact CCAGAGAU m6b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-583 cctCTCTTTGagact CAAAGAGG m7a Created HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-616-5p cctctcTTTGAGact ACUCAAAA m6b Created HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-6856-5p CCTCTCTTtgagact AAGAGAGG m8a Created HHRBL_11087_BCBL1-2of3-SCL_11584

Mutation Mutation ID Sample Name Cancer Type
chr4:g.173040002A>T COSM50527 TCGA-AU-3779-01 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3187-3p gattttcATGGCCAg UUGGCCAU m7b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-4529-5p gattttcATGGCCag AGGCCAUC m6b Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584
hsa-miR-548s gattttcTTGGCCAg AUGGCCAA m7b Created HHRBL_11087_BCBL1-2of3-SCL_11584

Mutation Mutation ID Sample Name Cancer Type
chr4:g.173039999T>A COSM304486 CRC-8 [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4668-3p gaaGATTTTCatggc GAAAAUCC m7a Disrupted HHRBL_11087_BCBL1-2of3-SCL_11584

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952204G>T COSM1053238 TCGA-BK-A0C9-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-3p tggCCTGGGacgtgc CCCCAGGG m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4438 tgGCCTGTGacgtgc CACAGGCU m7a (m6a->m7a) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4726-3p tggCCTGGGacgtgc ACCCAGGU m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-513a-5p tggCCTGTGAcgtgc UUCACAGG m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6840-3p tggCCTGGGacgtgc GCCCAGGA m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952203G>A COSM460652 TCGA-DR-A0ZM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-3p gtggCCTGGGacgtg CCCCAGGG m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4717-5p GTGGCCTAggacgtg UAGGCCAC m8a Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4726-3p gtggCCTGGGacgtg ACCCAGGU m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-5571-3p gtggCCTAGGACgtg GUCCUAGG m8a Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-5704 gTGGCCTAggacgtg UUAGGCCA m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6840-3p gtggCCTGGGacgtg GCCCAGGA m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952194C>T COSM3917461 TCGA-FW-A3R5-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5003-5p atggcTGTTGTGgcc UCACAACA m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952168C>A COSM1539892 TCGA-91-6848-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1915-5p tcaagtGCAAGGact ACCUUGCC m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4325 tcAAGTGCAAggact UUGCACUU m8a Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-502-5p tcaagtGCAAGGAct AUCCUUGC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6841-3p tcaagTGCAAGGact ACCUUGCA m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952155A>C COSM4123460 TCGA-CG-5721-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4327 ctgcGCAAGCagctc GGCUUGCA m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4520-5p ctgcgCACGCAGctc CCUGCGUG m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-933 cTGCGCACgcagctc UGUGCGCA m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952147G>T COSM3946181 227_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4448 agAAGGAGCtgcgca GGCUCCUU m7b (m7b->m6b) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4660 agaagGAGCTGCgca UGCAGCUC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6736-3p agaaGGAGCTGcgca UCAGCUCC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952145G>A COSM1695261 YUKLAB [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-103a-2-5p ccagAAGAAGCTgcg AGCUUCUU m8a Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-1237-3p cCAGAAGGAgctgcg UCCUUCUG m8a (m8a->m7a) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4448 ccagAAGGAGCtgcg GGCUCCUU m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4659a-3p ccAGAAGAAgctgcg UUUCUUCU m7b (m6b->m7b) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4659b-3p ccAGAAGAAgctgcg UUUCUUCU m7b (m6b->m7b) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4660 ccagaagGAGCTGCg UGCAGCUC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4778-3p ccaGAAGAAGctgcg UCUUCUUC m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6736-3p ccagaaGGAGCTGcg UCAGCUCC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6868-3p ccAGAAGGAgctgcg UUCCUUCU m7b (m7b->m6b) HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952136G>A COSM257004 TCGA-AG-3892-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1229-5p catctCTACCCAgaa GUGGGUAG m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-1285-3p catctcTGCCCAGAa UCUGGGCA m8a Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-197-5p catcTCTACCCagaa CGGGUAGA m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-3132 catcTCTACCCAgaa UGGGUAGA m8a Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-3187-5p catctcTGCCCAGaa CCUGGGCA m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-378g catctctGCCCAGaa ACUGGGCU m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4451 catCTCTACCcagaa UGGUAGAG m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4486 catctctGCCCAGaa GCUGGGCG m6b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4756-3p cATCTCTGcccagaa CCAGAGAU m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-5189-5p catctcTGCCCAGAa UCUGGGCA m8a Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-612 catctcTGCCCAGaa GCUGGGCA m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6776-5p catctctACCCAGAa UCUGGGUG m7a Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6832-5p caTCTCTACccagaa AGUAGAGA m7b (m6b->m7b) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6860 catctcTGCCCAGaa ACUGGGCA m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6861-5p catctcTACCCAGaa ACUGGGUA m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952134C>T COSM3602048 TCGA-BF-A1Q0-01 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4756-3p gacATCTCTGcccag CCAGAGAU m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952132C>A COSM1053237 TCGA-BS-A0UV-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-190a-5p gggACATATCtgccc UGAUAUGU m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-190b gggACATATCtgccc UGAUAUGU m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-219b-5p gGGACATCTctgccc AGAUGUCC m8a (m8a->m7a) HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4756-3p gggacATCTCTGccc CCAGAGAU m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6834-3p GGGACATAtctgccc UAUGUCCC m8a Created HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952128A>G COSM4908738 TCGA-P5-A5F2-01 [central_nervous_system][brain][glioma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219b-5p acgggGGACATCTct AGAUGUCC m8a Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4313 acgGGGGGCatctct AGCCCCCU m6b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-4708-5p acgggggGCATCTCt AGAGAUGC m7b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6834-3p acggGGGACATctct UAUGUCCC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172952127G>A COSM3602047 TCGA-D3-A5GO-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-219b-5p cacgggGGACATCTc AGAUGUCC m8a Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-642b-5p cacgGGGAACatctc GGUUCCCU m6b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6763-3p caCGGGGAacatctc CUCCCCGG m6b Created HHRBL_11086_BCBL1-2of3-SCL_4005
hsa-miR-6834-3p cacggGGGACATctc UAUGUCCC m7b Disrupted HHRBL_11086_BCBL1-2of3-SCL_4005

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172931259C>A COSM402538 LUAD-5V8LT [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4755-3p ggacaaGCCTGGCaa AGCCAGGC m7b Disrupted HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-5006-5p ggacaagCCTGGCAa UUGCCAGG m7b Disrupted HHRBL_11085_BCBL1-2of3-SCL_920

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172931247A>T COSM355223 LUAD-74TBW [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1252-5p aagTTCCTTCTggga AGAAGGAA m8a Created HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-488-5p aagttccATCTGGGa CCCAGAUA m7a Disrupted HHRBL_11085_BCBL1-2of3-SCL_920

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172931229C>T COSM1179335 SWE-1A [prostate][NS][adenoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1-5p ggAAGTATGTtccat ACAUACUU m8a Created HHRBL_11085_BCBL1-2of3-SCL_920

Mutation Mutation ID Sample Name Cancer Type
chr4:g.172931223G>A COSM3602045 TCGA-D3-A3MU-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3137 tCTACAGAaagtacg UCUGUAGC m7a Created HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-3686 tcTACAGAaagtacg AUCUGUAA m6b Created HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-4652-3p tctACAGAAagtacg GUUCUGUU m6b Created HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-486-5p tcTACAGGAagtacg UCCUGUAC m7a (m7a->m6a) HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-7152-5p tctACAGGAAgtacg UUUCCUGU m7b Disrupted HHRBL_11085_BCBL1-2of3-SCL_920
Mutation Mutation ID Sample Name Cancer Type
chr4:g.172931183T>C COSM1695260 YURUS [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.


Mutation Mutation ID Sample Name Cancer Type
chr4:g.172931174G>T COSM1428595 TCGA-AZ-6598-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-155-3p atgtgTGTAGGAGaa CUCCUACA m8a Created HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-3941 atGTGTGTAggagaa UUACACAC m7b (m6b->m7b) HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-4279 atgtgtgGAGGAGAa CUCUCCUC m7b Disrupted HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-4691-5p atgtgTGGAGGAgaa GUCCUCCA m7b Disrupted HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-603 atGTGTGTaggagaa CACACACU m6b Created HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-6749-3p atgtgtGGAGGAGaa CUCCUCCC m7a Disrupted HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-6792-3p atgtgTGGAGGAGaa CUCCUCCA m8a Disrupted HHRBL_11085_BCBL1-2of3-SCL_920
hsa-miR-8485 aTGTGTGTaggagaa CACACACA m7b Created HHRBL_11085_BCBL1-2of3-SCL_920

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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