SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033719
Gene Symbol: ZNF404

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.43873778C>A COSM3289480 PTC-14C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-8066 tttgCACATTactga CAAUGUGA m6b Created HPCB1_20817_G26106.1_44377934
hsa-miR-4735-3p tttGCACCTTactga AAAGGUGC m7b Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-18a-5p tttGCACCTTActga UAAGGUGC m8a Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-19b-3p TTTGCACAttactga UGUGCAAA m8a Created HPCB1_20817_G26106.1_44377934
hsa-miR-19a-3p TTTGCACAttactga UGUGCAAA m8a Created HPCB1_20817_G26106.1_44377934
hsa-miR-18b-5p tttGCACCTTActga UAAGGUGC m8a Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-18a-5p tttGCACCTTActga UAAGGUGC m8a Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-18b-5p tttGCACCTTActga UAAGGUGC m8a Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-19a-3p TTTGCACAttactga UGUGCAAA m8a Created HPCB1_20817_G26106.1_44377934
hsa-miR-19b-3p TTTGCACAttactga UGUGCAAA m8a Created HPCB1_20817_G26106.1_44377934
hsa-miR-4735-3p tttGCACCTTactga AAAGGUGC m7b Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-8066 tttgCACATTactga CAAUGUGA m6b Created HPCB1_20817_G26106.1_44377934

Mutation Mutation ID Sample Name Cancer Type
chr19:g.43873776T>G COSM4132007 PTC-14C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-125a-3p tgCACCTGactgaac ACAGGUGA m6b Created HPCB1_20817_G26106.1_44377934
hsa-miR-764 tGCACCTGactgaac GCAGGUGC m7b Created HPCB1_20817_G26106.1_44377934
hsa-miR-545-5p tgcaccTTACTGAac UCAGUAAA m7a Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-18a-5p tGCACCTTActgaac UAAGGUGC m8a (m8a->m7a) HPCB1_20817_G26106.1_44377934
hsa-miR-4735-3p tGCACCTTactgaac AAAGGUGC m7b Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-4704-3p tgcaccTGACTGAac UCAGUCAC m7a Created HPCB1_20817_G26106.1_44377934
hsa-miR-222-5p tgcacctTACTGAac CUCAGUAG m6b Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-18b-5p tGCACCTTActgaac UAAGGUGC m8a (m8a->m7a) HPCB1_20817_G26106.1_44377934
hsa-miR-18a-5p tGCACCTTActgaac UAAGGUGC m8a (m8a->m7a) HPCB1_20817_G26106.1_44377934
hsa-miR-18b-5p tGCACCTTActgaac UAAGGUGC m8a (m8a->m7a) HPCB1_20817_G26106.1_44377934
hsa-miR-222-5p tgcacctTACTGAac CUCAGUAG m6b Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-4704-3p tgcaccTGACTGAac UCAGUCAC m7a Created HPCB1_20817_G26106.1_44377934
hsa-miR-4735-3p tGCACCTTactgaac AAAGGUGC m7b Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-545-5p tgcaccTTACTGAac UCAGUAAA m7a Disrupted HPCB1_20817_G26106.1_44377934
hsa-miR-764 tGCACCTGactgaac GCAGGUGC m7b Created HPCB1_20817_G26106.1_44377934

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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