SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033714
Gene Symbol: NOP2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.6563330C>T COSM4514380 CSCC-31-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4668-5p tggaccTTTTCCCTc AGGGAAAA m8a Created HPRT3_6570_G8607.1_6672492
hsa-miR-6077 tggacCTCTTCCCtc GGGAAGAG m8a Disrupted HPRT3_6570_G8607.1_6672492
hsa-miR-9500 tggacctCTTCCCTc AAGGGAAG m7b Disrupted HPRT3_6570_G8607.1_6672492
hsa-miR-6124 tggacCTTTTCCCtc GGGAAAAG m8a Created HPRT3_6570_G8607.1_6672492
hsa-miR-5584-5p tggacctTTTCCCTc CAGGGAAA m7b Created HPRT3_6570_G8607.1_6672492
hsa-miR-4668-5p tggaccTTTTCCCTc AGGGAAAA m8a Created HPRT3_6570_G8607.1_6672492
hsa-miR-6077 tggacCTCTTCCCtc GGGAAGAG m8a Disrupted HPRT3_6570_G8607.1_6672492
hsa-miR-9500 tggacctCTTCCCTc AAGGGAAG m7b Disrupted HPRT3_6570_G8607.1_6672492
hsa-miR-6124 tggacCTTTTCCCtc GGGAAAAG m8a Created HPRT3_6570_G8607.1_6672492
hsa-miR-5584-5p tggacctTTTCCCTc CAGGGAAA m7b Created HPRT3_6570_G8607.1_6672492

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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