SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033714
Gene Symbol: NOP2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr12:g.6566166G>A COSM4599533 UM-SCC-2 [upper_aerodigestive_tract][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7157-5p cgaggacAATGCTGa UCAGCAUU m7b Created HHHNH_2541_NOP2|NM_001033714|exon_CDS|-3.40036259906121|0.181439242653208
hsa-miR-4310 cgaggacAATGCTGa GCAGCAUU m7b Created HHHNH_2541_NOP2|NM_001033714|exon_CDS|-3.40036259906121|0.181439242653208
hsa-miR-2355-3p cgAGGACAATgctga AUUGUCCU m8a Created HHHNH_2541_NOP2|NM_001033714|exon_CDS|-3.40036259906121|0.181439242653208
hsa-miR-7157-5p cgaggacAATGCTGa UCAGCAUU m7b Created HHHNH_2541_NOP2|NM_001033714|exon_CDS|-3.40036259906121|0.181439242653208
hsa-miR-4310 cgaggacAATGCTGa GCAGCAUU m7b Created HHHNH_2541_NOP2|NM_001033714|exon_CDS|-3.40036259906121|0.181439242653208
hsa-miR-2355-3p cgAGGACAATgctga AUUGUCCU m8a Created HHHNH_2541_NOP2|NM_001033714|exon_CDS|-3.40036259906121|0.181439242653208

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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