SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033569
Gene Symbol: AMZ2

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr17:g.68254529C>T COSM4506168 CSCC-56-T [skin][head_neck][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1299 ttataTTCCAGAAat UUCUGGAA m8a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-4762-3p ttatattTCAGAAat CUUCUGAU m6b Created HPCB1_17217_G21665.1_66250670
hsa-miR-4766-5p ttataTTTCAGAaat UCUGAAAG m7a Created HPCB1_17217_G21665.1_66250670
hsa-miR-4782-5p ttatatTCCAGAAat UUCUGGAU m7a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-516b-5p ttatatTCCAGAaat AUCUGGAG m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-5706 ttatatTCCAGAAat UUCUGGAU m7a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-6128 ttatATTCCAGaaat ACUGGAAU m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-6505-5p ttaTATTCCAgaaat UUGGAAUA m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-875-3p ttataTTCCAGaaat CCUGGAAA m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-1299 ttataTTCCAGAAat UUCUGGAA m8a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-4762-3p ttatattTCAGAAat CUUCUGAU m6b Created HPCB1_17217_G21665.1_66250670
hsa-miR-4766-5p ttataTTTCAGAaat UCUGAAAG m7a Created HPCB1_17217_G21665.1_66250670
hsa-miR-4782-5p ttatatTCCAGAAat UUCUGGAU m7a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-516b-5p ttatatTCCAGAaat AUCUGGAG m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-5706 ttatatTCCAGAAat UUCUGGAU m7a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-6128 ttatATTCCAGaaat ACUGGAAU m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-6505-5p ttaTATTCCAgaaat UUGGAAUA m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-875-3p ttataTTCCAGaaat CCUGGAAA m6b Disrupted HPCB1_17217_G21665.1_66250670

Mutation Mutation ID Sample Name Cancer Type
chr17:g.68254522T>C COSM287828 TCGA-AG-3574-01 [large_intestine][rectum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1244 acAACTACTatattc AAGUAGUU m7b (m6b->m7b) HPCB1_17217_G21665.1_66250670
hsa-miR-369-3p acaacTATTATattc AAUAAUAC m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-374a-5p acaacTATTATAttc UUAUAAUA m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-374b-5p acaacTATTATATtc AUAUAAUA m8a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-4703-3p aCAACTACtatattc UGUAGUUG m7b Created HPCB1_17217_G21665.1_66250670
hsa-miR-5692b acaacTATTATattc AAUAAUAU m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-5692c acaacTATTATattc AAUAAUAU m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-633 acaACTATTAtattc CUAAUAGU m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-1244 acAACTACTatattc AAGUAGUU m7b (m6b->m7b) HPCB1_17217_G21665.1_66250670
hsa-miR-369-3p acaacTATTATattc AAUAAUAC m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-374a-5p acaacTATTATAttc UUAUAAUA m7b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-374b-5p acaacTATTATATtc AUAUAAUA m8a Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-4703-3p aCAACTACtatattc UGUAGUUG m7b Created HPCB1_17217_G21665.1_66250670
hsa-miR-5692b acaacTATTATattc AAUAAUAU m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-5692c acaacTATTATattc AAUAAUAU m6b Disrupted HPCB1_17217_G21665.1_66250670
hsa-miR-633 acaACTATTAtattc CUAAUAGU m7b Disrupted HPCB1_17217_G21665.1_66250670

Mutation Mutation ID Sample Name Cancer Type
chr17:g.68250446C>T COSM1385453 TCGA-AA-3663-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-20a-3p aaacaAATGCAGcat ACUGCAUU m7b Created HPCB1_17216_G21664.1_66246585
hsa-miR-8068 aAACAAACgcagcat UGUUUGUU m7b Disrupted HPCB1_17216_G21664.1_66246585
hsa-miR-20a-3p aaacaAATGCAGcat ACUGCAUU m7b Created HPCB1_17216_G21664.1_66246585
hsa-miR-8068 aAACAAACgcagcat UGUUUGUU m7b Disrupted HPCB1_17216_G21664.1_66246585

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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