SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033503
Gene Symbol: SAR1B

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.134621018T>C COSM1060907 TCGA-AP-A059-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-539-5p tATTTCTCggattgg GGAGAAAU m7b Created HHHNE_16020_SAR1B|NM_001033503|exon_CDS|-5.98200370038434|-0.346515859871942

Mutation Mutation ID Sample Name Cancer Type
chr5:g.134608389G>A COSM1194871 H322T [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-591 tttatATGGTCagac AGACCAUG m6b Disrupted HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-345-5p tttatatAGTCAGac GCUGACUC m6b Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-4256 tttatatGGTCAGAc AUCUGACC m7b Disrupted HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-4750-3p tttatatGGTCAGac CCUGACCC m6b Disrupted HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-625-3p tttaTATAGTCagac GACUAUAG m7a Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508

Mutation Mutation ID Sample Name Cancer Type
chr5:g.134608383A>T COSM481940 TCGA-B0-5119-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-943 tggtCAGTCAacagg CUGACUGU m6b Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-888-3p tgGTCAGTCaacagg GACUGACA m7a (m6a->m7a) HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-6857-3p tggTCAGTCAacagg UGACUGAG m7a Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-6855-3p tgGTCAGTCaacagg AGACUGAC m7b (m6b->m7b) HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-4256 tGGTCAGAcaacagg AUCUGACC m7b Disrupted HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-1267 tggtcagTCAACAGg CCUGUUGA m7b Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-3136-5p tggTCAGTCAacagg CUGACUGA m7b Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-1231 tggtCAGACAacagg GUGUCUGG m6b Disrupted HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-4439 tggTCAGTCAacagg GUGACUGA m7b Created HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-4513 tgGTCAGTCaacagg AGACUGAC m7b (m6b->m7b) HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508
hsa-miR-632 tggtCAGACAacagg GUGUCUGC m6b Disrupted HHHNE_16019_SAR1B|NM_001033503|exon_CDS|-6.59993804898165|1.21000964972508

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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