SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001033026
Gene Symbol: TMEM259

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010692T>C COSM4131129 PTC-10C [thyroid][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4649-5p tCTCGCCCggggcca UGGGCGAG m7b Created HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336
hsa-miR-5587-3p tctcgCCCGGGGCca GCCCCGGG m8a Created HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336
hsa-miR-874-5p tctcgccTGGGGCCa CGGCCCCA m7b Disrupted HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010674C>T COSM3756247 TCGA-CA-6716-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1247-3p ggagTCCCGGGcctg CCCCGGGA m7b Disrupted HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336
hsa-miR-1538 ggagtcCCGGGCCtg CGGCCCGG m7b Disrupted HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336
hsa-miR-4745-3p ggagtcCCGGGCCtg UGGCCCGG m7b Disrupted HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336
hsa-miR-4747-3p ggagtccCGGGCCTg AAGGCCCG m7b Disrupted HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336
hsa-miR-6840-3p ggagTCCTGGGCctg GCCCAGGA m8a Created HHHNA_11251_C19orf6|NM_001033026|exon_CDS|-4.01826682110556|0.453247634551336

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010480CA>A COSM4667191 T3535 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1268a cctccccCACGCCCcc CGGGCGUG m7b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-1268b cctccccCACGCCCcc CGGGCGUG m7b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-1275 ccTCCCCCACgccccc GUGGGGGA m8a Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-1343-5p cCTCCCCAcgccccc UGGGGAGC m7a Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-2110 ccTCCCCAcgccccc UUGGGGAA m6b Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-3150a-3p cCTCCCCAcgccccc CUGGGGAG m7b Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-4447 cctCCCCCACgccccc GGUGGGGG m7b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-4472 cctCCCCCACgccccc GGUGGGGG m7b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-4665-5p ccTCCCCCAcgccccc CUGGGGGA m7b (m7b->m6b) HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-4723-5p cCTCCCCCAcgccccc UGGGGGAG m8a (m8a->m7a) HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-491-5p ccTCCCCACgccccc AGUGGGGA m7b (m6b->m7b) HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-5010-5p ccTCCCCCacgccccc AGGGGGAU m6b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-5698 cCTCCCCCAcgccccc UGGGGGAG m8a (m8a->m7a) HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-625-5p ccTCCCCCacgccccc AGGGGGAA m6b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-6763-5p cCTCCCCAcgccccc CUGGGGAG m7b Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-6810-5p ccTCCCCAcgccccc AUGGGGAC m6b Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-6825-5p CCTCCCCAcgccccc UGGGGAGG m8a Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-6853-5p cctccCCCACGCcccc AGCGUGGG m7b Disrupted HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-6857-5p ccTCCCCAcgccccc UUGGGGAU m6b Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-6870-5p cCTCCCCCAcgccccc UGGGGGAG m8a (m8a->m7a) HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-7111-5p cCTCCCCCAcgccccc UGGGGGAG m8a (m8a->m7a) HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982
hsa-miR-939-5p cCTCCCCAcgccccc UGGGGAGC m7a Created HHHNA_11250_C19orf6|NM_001033026|exon_CDS|-4.73706297200347|0.0842138696383982

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010407C>T COSM3749446 TCGA-AZ-4615-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1224-3p cggtAGGTGGGccta CCCCACCU m7b Created HHHNA_11249_C19orf6|NM_001033026|exon_CDS|-4.04809810717336|-0.298821671640063
hsa-miR-4707-3p cggtaGGCGGGCcta AGCCCGCC m7b Disrupted HHHNA_11249_C19orf6|NM_001033026|exon_CDS|-4.04809810717336|-0.298821671640063
hsa-miR-4747-3p cggtaggCGGGCCTa AAGGCCCG m7b Disrupted HHHNA_11249_C19orf6|NM_001033026|exon_CDS|-4.04809810717336|-0.298821671640063

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010397C>T COSM229819 ME048T [skin][extremity][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6069 gCCTAGCCCggcctc GGGCUAGG m8a (m8a->m7a) HHHNA_11249_C19orf6|NM_001033026|exon_CDS|-4.04809810717336|-0.298821671640063

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010365G>T COSM4645315 LOVO [large_intestine][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1306-5p cgccctcGGAGGTGg CCACCUCC m7b Disrupted HHHNA_11248_C19orf6|NM_033420|exon_utr3|-4.03759194793039|0.281081213652657
hsa-miR-4257 cgcCCTCTGaggtgg CCAGAGGU m6b Created HHHNA_11248_C19orf6|NM_033420|exon_utr3|-4.03759194793039|0.281081213652657
hsa-miR-6847-5p cgcCCTCTGaggtgg ACAGAGGA m6b Created HHHNA_11248_C19orf6|NM_033420|exon_utr3|-4.03759194793039|0.281081213652657
hsa-miR-6873-5p cgCCCTCTGaggtgg CAGAGGGA m7a (m6a->m7a) HHHNA_11248_C19orf6|NM_033420|exon_utr3|-4.03759194793039|0.281081213652657

Mutation Mutation ID Sample Name Cancer Type
chr19:g.1010250C>T COSN7353495 8016470 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1285-3p gggacTGCCCAGcct UCUGGGCA m7b Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-3187-5p gggacTGCCCAGcct CCUGGGCA m7b Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-3652 gggactgTCCAGCCt CGGCUGGA m7b Created HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-4430 gggactgTCCAGCCt AGGCUGGA m7b Created HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-4505 gggactgCCCAGCCt AGGCUGGG m7b Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-4520-3p gggaCTGTCCAgcct UUGGACAG m7b Created HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-4638-3p gggacTGTCCAGcct CCUGGACA m7b Created HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-5189-5p gggacTGCCCAGcct UCUGGGCA m7b Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-5787 gggactgCCCAGCCt GGGCUGGG m7b Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-612 gggacTGCCCAGCct GCUGGGCA m8a Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109
hsa-miR-6860 gggacTGCCCAGcct ACUGGGCA m7b Disrupted HHHNA_11246_C19orf6|NM_001033026|exon_utr3|-4.29617871442487|-0.548853661768109

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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