SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001032396
Gene Symbol: PJA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162156C>T COSM1124310 TCGA-AP-A0LM-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1181 aatactGCGACGaag CCGUCGCC m6b Disrupted HPTA3_19701_G32007.1_68382005
hsa-miR-144-3p aATACTGTgacgaag UACAGUAU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-27a-3p aatACTGTGAcgaag UUCACAGU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-27b-3p aatACTGTGAcgaag UUCACAGU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-3681-3p aatACTGTGacgaag ACACAGUG m6b Created HPTA3_19701_G32007.1_68382005
hsa-miR-1181 aatactGCGACGaag CCGUCGCC m6b Disrupted HPTA3_19701_G32007.1_68382005
hsa-miR-144-3p aATACTGTgacgaag UACAGUAU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-27a-3p aatACTGTGAcgaag UUCACAGU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-27b-3p aatACTGTGAcgaag UUCACAGU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-3681-3p aatACTGTGacgaag ACACAGUG m6b Created HPTA3_19701_G32007.1_68382005

Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162156C>A COSM4110697 TCGA-BR-6452-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1181 aatactGCGACGaag CCGUCGCC m6b Disrupted HPTA3_19701_G32007.1_68382005
hsa-miR-222-5p aaTACTGAGacgaag CUCAGUAG m7a (m6a->m7a) HPTA3_19701_G32007.1_68382005
hsa-miR-4264 aatACTGAGacgaag ACUCAGUC m6b Created HPTA3_19701_G32007.1_68382005
hsa-miR-4797-3p aaTACTGAGAcgaag UCUCAGUA m8a Created HPTA3_19701_G32007.1_68382005
hsa-miR-1181 aatactGCGACGaag CCGUCGCC m6b Disrupted HPTA3_19701_G32007.1_68382005
hsa-miR-222-5p aaTACTGAGacgaag CUCAGUAG m7a (m6a->m7a) HPTA3_19701_G32007.1_68382005
hsa-miR-4264 aatACTGAGacgaag ACUCAGUC m6b Created HPTA3_19701_G32007.1_68382005
hsa-miR-4797-3p aaTACTGAGAcgaag UCUCAGUA m8a Created HPTA3_19701_G32007.1_68382005

Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162152G>A COSM1124308 TCGA-AP-A056-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1181 ctGCGACGaagactc CCGUCGCC m6b Disrupted HPTA3_19701_G32007.1_68382005
hsa-miR-6844 ctgcgACAAAGActc UUCUUUGU m7b Created HPTA3_19701_G32007.1_68382005
hsa-miR-1181 ctGCGACGaagactc CCGUCGCC m6b Disrupted HPTA3_19701_G32007.1_68382005
hsa-miR-6844 ctgcgACAAAGActc UUCUUUGU m7b Created HPTA3_19701_G32007.1_68382005

Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162050C>T COSM613584 TCGA-75-6207-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p gactctGCCGGGGaa GCCCCGGC m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-4797-5p gACTCTGTCggggaa GACAGAGU m8a (m7a->m8a) HPTA3_19700_G32006.1_68381887
hsa-miR-5587-3p gactctgCCGGGGaa GCCCCGGG m6b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-6763-3p gactctgCCGGGGAa CUCCCCGG m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-4707-5p gactctGCCGGGGaa GCCCCGGC m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-4797-5p gACTCTGTCggggaa GACAGAGU m8a (m7a->m8a) HPTA3_19700_G32006.1_68381887
hsa-miR-5587-3p gactctgCCGGGGaa GCCCCGGG m6b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-6763-3p gactctgCCGGGGAa CUCCCCGG m7b Disrupted HPTA3_19700_G32006.1_68381887

Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162049C>T COSM4878750 TCGA-KK-A59V-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p actctgCTGGGGAaa AUCCCCAG m7b Created HPTA3_19700_G32006.1_68381887
hsa-miR-4530 actCTGCTGGGgaaa CCCAGCAG m8a Created HPTA3_19700_G32006.1_68381887
hsa-miR-4707-5p actctGCCGGGGaaa GCCCCGGC m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-5587-3p actctgCCGGGGaaa GCCCCGGG m6b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-6763-3p actctgCCGGGGAaa CUCCCCGG m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-922 acTCTGCTGgggaaa GCAGCAGA m7b (m6b->m7b) HPTA3_19700_G32006.1_68381887
hsa-miR-2355-5p actctgCTGGGGAaa AUCCCCAG m7b Created HPTA3_19700_G32006.1_68381887
hsa-miR-4530 actCTGCTGGGgaaa CCCAGCAG m8a Created HPTA3_19700_G32006.1_68381887
hsa-miR-4707-5p actctGCCGGGGaaa GCCCCGGC m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-5587-3p actctgCCGGGGaaa GCCCCGGG m6b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-6763-3p actctgCCGGGGAaa CUCCCCGG m7b Disrupted HPTA3_19700_G32006.1_68381887
hsa-miR-922 acTCTGCTGgggaaa GCAGCAGA m7b (m6b->m7b) HPTA3_19700_G32006.1_68381887

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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