SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001032396
Gene Symbol: PJA1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162050C>T COSM613584 TCGA-75-6207-01 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4707-5p gactctGCCGGGGaa GCCCCGGC m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4797-5p gACTCTGTCggggaa GACAGAGU m8a (m7a->m8a) HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-5587-3p gactctgCCGGGGaa GCCCCGGG m6b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-6763-3p gactctgCCGGGGAa CUCCCCGG m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4707-5p gactctGCCGGGGaa GCCCCGGC m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4797-5p gACTCTGTCggggaa GACAGAGU m8a (m7a->m8a) HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-5587-3p gactctgCCGGGGaa GCCCCGGG m6b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-6763-3p gactctgCCGGGGAa CUCCCCGG m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684

Mutation Mutation ID Sample Name Cancer Type
chrX:g.69162049C>T COSM4878750 TCGA-KK-A59V-01 [prostate][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-2355-5p actctgCTGGGGAaa AUCCCCAG m7b Created HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4530 actCTGCTGGGgaaa CCCAGCAG m8a Created HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4707-5p actctGCCGGGGaaa GCCCCGGC m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-5587-3p actctgCCGGGGaaa GCCCCGGG m6b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-6763-3p actctgCCGGGGAaa CUCCCCGG m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-922 acTCTGCTGgggaaa GCAGCAGA m7b (m6b->m7b) HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-2355-5p actctgCTGGGGAaa AUCCCCAG m7b Created HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4530 actCTGCTGGGgaaa CCCAGCAG m8a Created HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-4707-5p actctGCCGGGGaaa GCCCCGGC m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-5587-3p actctgCCGGGGaaa GCCCCGGG m6b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-6763-3p actctgCCGGGGAaa CUCCCCGG m7b Disrupted HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684
hsa-miR-922 acTCTGCTGgggaaa GCAGCAGA m7b (m6b->m7b) HHHNE_13692_PJA1|NM_022368|exon_CDS|-4.85051917682879|0.816470242780684

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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