SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database

Prediction criteria: TargetScan sites only     All 6mer or longer seed matches

Transcript ID: NM_001032280
Gene Symbol: TFAP2A

Somatic mutations that impact miRNA target sites



Mutation Mutation ID Sample Name Cancer Type
chr6:g.10400472G>T COSM1672230 HCC2998 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5701 gtGACAATAAaaaac UUAUUGUC m8a Created HPRT3_22266_G29740.1_10400701
hsa-miR-578 gtgACAAGAAaaaac CUUCUUGU m7b Disrupted HPRT3_22266_G29740.1_10400701
hsa-miR-5701 gtGACAATAAaaaac UUAUUGUC m8a Created HPRT3_22266_G29740.1_10400701
hsa-miR-578 gtgACAAGAAaaaac CUUCUUGU m7b Disrupted HPRT3_22266_G29740.1_10400701
hsa-miR-5701 gtGACAATAAaaaac UUAUUGUC m8a Created HPRT3_22266_G29740.1_10400701
hsa-miR-578 gtgACAAGAAaaaac CUUCUUGU m7b Disrupted HPRT3_22266_G29740.1_10400701

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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