SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001032280
Gene Symbol: TFAP2A

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr6:g.10402497T>G COSM4831593 TCGA-EK-A2PM-01 [cervix][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3923 tcACTAGTagagggt AACUAGUA m6b Disrupted HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-6845-3p tcactAGGAGAGGgt CCUCUCCU m8a Created HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-6892-3p tcactagGAGAGGGt UCCCUCUC m7b Created HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-7975 tcACTAGGAgagggt AUCCUAGU m7b (m6b->m7b) HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-3923 tcACTAGTagagggt AACUAGUA m6b Disrupted HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-6845-3p tcactAGGAGAGGgt CCUCUCCU m8a Created HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-6892-3p tcactagGAGAGGGt UCCCUCUC m7b Created HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-7975 tcACTAGGAgagggt AUCCUAGU m7b (m6b->m7b) HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-3923 tcACTAGTagagggt AACUAGUA m6b Disrupted HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-6845-3p tcactAGGAGAGGgt CCUCUCCU m8a Created HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-6892-3p tcactagGAGAGGGt UCCCUCUC m7b Created HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-7975 tcACTAGGAgagggt AUCCUAGU m7b (m6b->m7b) HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398

Mutation Mutation ID Sample Name Cancer Type
chr6:g.10402492G>T COSM1544807 TCGA-75-7031-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7848-3p agtaGAGGGTAagcg CUACCCUC m7b Disrupted HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-7848-3p agtaGAGGGTAagcg CUACCCUC m7b Disrupted HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398
hsa-miR-7848-3p agtaGAGGGTAagcg CUACCCUC m7b Disrupted HHHNE_18766_TFAP2A|NM_001032280|exon_CDS|-5.40230969937906|1.31412615516398

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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