SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001031716
Gene Symbol: NABP1

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr2:g.191685809C>G COSN8608268 360_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-7843-5p tacaTGCCCTacttg GAGGGCAG m6b Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-6879-5p tacaTGCCCTacttg CAGGGCAG m6b Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-6862-5p taCATGCCCtacttg CGGGCAUG m7b (m7b->m6b) HPSD3_5625_G7495.1_192550552
hsa-miR-6735-5p tacaTGCCCTacttg CAGGGCAG m6b Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-562 tacatgcGCTACTTg AAAGUAGC m7b Created HPSD3_5625_G7495.1_192550552
hsa-miR-4761-3p tacATGCCCTacttg GAGGGCAU m7b Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-4436b-3p tacaTGCCCTacttg CAGGGCAG m6b Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-4253 taCATGCCCTacttg AGGGCAUG m8a Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-3945 tacATGCCCTacttg AGGGCAUA m7a Disrupted HPSD3_5625_G7495.1_192550552
hsa-miR-4632-5p tacaTGCCCTacttg GAGGGCAG m6b Disrupted HPSD3_5625_G7495.1_192550552

Mutation Mutation ID Sample Name Cancer Type
chr2:g.191685690A>G COSM718772 TCGA-56-5897-01 [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4703-3p caCAACTACAaggaa UGUAGUUG m8a Disrupted HPSD3_5624_G7494.1_192550400
hsa-miR-502-5p cacaactGCAAGGAa AUCCUUGC m7b Created HPSD3_5624_G7494.1_192550400
hsa-miR-6516-5p cacaACTGCAAggaa UUUGCAGU m7b Created HPSD3_5624_G7494.1_192550400
hsa-miR-6841-3p cacaacTGCAAGGaa ACCUUGCA m7b Created HPSD3_5624_G7494.1_192550400
hsa-miR-1915-5p cacaactGCAAGGaa ACCUUGCC m6b Created HPSD3_5624_G7494.1_192550400

Mutation Mutation ID Sample Name Cancer Type
chr2:g.191685676A>C COSM476680 TCGA-BP-5173-01 [kidney][NS][carcinoma][clear_cell_renal_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID

No TargetScan sites are altered. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.
*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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