SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001031665
Gene Symbol: ZNF816

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.52951513G>T COSM1526293 TCGA-69-7979-01 [lung][right_upper_lobe][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1914-5p ccaCACAGGGacgtt CCCUGUGC m7a Disrupted HPRT3_13744_G18149.1_53454780

Mutation Mutation ID Sample Name Cancer Type
chr19:g.52951510A>T COSM1234649 587228 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4725-5p caCAGGGTCgttgca AGACCCUG m7b (m6b->m7b) HPRT3_13744_G18149.1_53454780
hsa-miR-504-5p caCAGGGTCgttgca AGACCCUG m7b (m6b->m7b) HPRT3_13744_G18149.1_53454780
hsa-miR-891a-5p cacagggTCGTTGCa UGCAACGA m7b Created HPRT3_13744_G18149.1_53454780

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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