SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001031665
Gene Symbol: ZNF816

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950372T>C COSM1271851 ESO-1059 [oesophagus][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5194 tcatCCCCTCAatac UGAGGGGU m7a Created HPCB1_20954_G26264.1_53453612
hsa-miR-6126 tcatcCCTTCAatac GUGAAGGC m6b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-4461 tcatcccCTCAATac GAUUGAGA m6b Created HPCB1_20954_G26264.1_53453612
hsa-miR-423-5p tcatCCCCTCAatac UGAGGGGC m7a Created HPCB1_20954_G26264.1_53453612
hsa-miR-7515 tcaTCCCTTCaatac AGAAGGGA m7b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-6864-5p tcatCCCTTCAAtac UUGAAGGG m8a Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-6834-5p tcatcCCCTCAatac GUGAGGGA m6b Created HPCB1_20954_G26264.1_53453612
hsa-miR-6757-5p tCATCCCTtcaatac UAGGGAUG m7b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-6738-5p tcatCCCCTCaatac CGAGGGGU m6b Created HPCB1_20954_G26264.1_53453612
hsa-miR-6734-5p tcatCCCCTCAAtac UUGAGGGG m8a Created HPCB1_20954_G26264.1_53453612
hsa-miR-3184-5p tcatCCCCTCAatac UGAGGGGC m7a Created HPCB1_20954_G26264.1_53453612
hsa-miR-3179 tcatCCCTTCaatac AGAAGGGG m6b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-1914-3p tcatCCCCTCaatac GGAGGGGU m6b Created HPCB1_20954_G26264.1_53453612
hsa-miR-1226-5p tcatcCCCTCAatac GUGAGGGC m6b Created HPCB1_20954_G26264.1_53453612

Mutation Mutation ID Sample Name Cancer Type
chr19:g.52950352C>T COSM3538237 TCGA-EE-A2GM-06 [skin][NS][malignant_melanoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4302 tacacttCACACTGg CCAGUGUG m7b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-3616-5p taCACTTCAcactgg AUGAAGUG m7b (m7b->m6b) HPCB1_20954_G26264.1_53453612
hsa-miR-3611 tacaCTTCACActgg UUGUGAAG m7b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-4795-5p taCACTTCacactgg AGAAGUGG m6b Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-573 taCACTTCAcactgg CUGAAGUG m7b (m7b->m6b) HPCB1_20954_G26264.1_53453612
hsa-miR-595 tACACTTCacactgg GAAGUGUG m7a Disrupted HPCB1_20954_G26264.1_53453612
hsa-miR-93-5p taCACTTTacactgg CAAAGUGC m6b Created HPCB1_20954_G26264.1_53453612

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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