SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001030287
Gene Symbol: ATF3

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr1:g.212619514C>A COSM903584 TCGA-A5-A0GB-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4311 gagaaacCTCTTTat GAAAGAGA m6b Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-4662b gagaaaCATCTTTat AAAGAUGG m7a Created HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-583 gagaaaCCTCTTTat CAAAGAGG m7b Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733

Mutation Mutation ID Sample Name Cancer Type
chr1:g.212619507G>C COSM425254 TCGA-AR-A1AN-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-215-3p aagATGACAGAaacc UCUGUCAU m8a Created HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-452-3p aAGATGAGagaaacc CUCAUCUG m7a Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-4652-3p aagatgACAGAAacc GUUCUGUU m6b Created HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-4743-3p aagatGACAGAAAcc UUUCUGUC m8a Created HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-4768-5p aagatGAGAGAAacc AUUCUCUC m7b Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-6773-3p aagaTGACAGaaacc ACUGUCAC m6b Created HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-6809-3p aagatgAGAGAAacc CUUCUCUU m6b Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-6833-3p aagatGAGAGAAAcc UUUCUCUC m8a Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-6870-3p aaGATGAGagaaacc GCUCAUCC m6b Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-6873-3p aagatGAGAGAAacc UUCUCUCU m7a Disrupted HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733
hsa-miR-6888-3p aagatGACAGAaacc AUCUGUCU m6b Created HHHNE_1417_ATF3|NM_001030287|exon_CDS|-5.30256543301463|-2.16640066769733

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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