SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001025433
Gene Symbol: NQO1
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr16:g.69711242C>T COSM148097 GC8_T [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-377-5p cttagAACCTCaact AGAGGUUG m6b Disrupted HPCB1_16261_G20466.1_69745129
hsa-miR-182-3p ctTAGAACCtcaact UGGUUCUA m7b (m7b->m6b) HPCB1_16261_G20466.1_69745129
hsa-miR-4263 CTTAGAATctcaact AUUCUAAG m8a Created HPCB1_16261_G20466.1_69745129
hsa-miR-655-5p cttagAACCTCaact AGAGGUUA m6b Disrupted HPCB1_16261_G20466.1_69745129
hsa-miR-6086 cttagAACCTCaact GGAGGUUG m6b Disrupted HPCB1_16261_G20466.1_69745129
hsa-miR-5186 cttagAATCTCaact AGAGAUUG m6b Created HPCB1_16261_G20466.1_69745129

Mutation Mutation ID Sample Name Cancer Type
chr16:g.69711009C>G COSM435634 TCGA-A8-A086-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4642 agtccATGCCAactg AUGGCAUC m6b Created HPCB1_16260_G20464.1_69744902
hsa-miR-4425 agtccaTCCCAACtg UGUUGGGA m7b Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-4259 agtccatCCCAACTg CAGUUGGG m7b Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-3622b-5p agtCCATGCCaactg AGGCAUGG m7b Created HPCB1_16260_G20464.1_69744902
hsa-miR-769-3p agtccATCCCAactg CUGGGAUC m6b Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-6728-5p agtcCATCCCAActg UUGGGAUG m8a Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-6513-5p agtccATCCCAActg UUUGGGAU m7b Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-1193 agtCCATCCCaactg GGGAUGGU m7a Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-5187-5p agtcCATCCCAactg UGGGAUGA m7a Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-5089-5p agtccATCCCAactg GUGGGAUU m6b Disrupted HPCB1_16260_G20464.1_69744902
hsa-miR-4715-5p agtccatGCCAACTg AAGUUGGC m7b Created HPCB1_16260_G20464.1_69744902

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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