SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001025
Gene Symbol: RPS23
Browse Pathways

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr5:g.82277803A>C COSM3856661 TCGA-BR-8680-01 [stomach][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3663-5p accgacgAGACCAGa GCUGGUCU m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6843-3p accgacGAGACCAga AUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6848-3p accgacGAGACCAga GUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6843-3p accgacGAGACCAga AUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6848-3p accgacGAGACCAga GUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-3663-5p accgacgAGACCAGa GCUGGUCU m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965

Mutation Mutation ID Sample Name Cancer Type
chr5:g.82277800C>G COSM4769074 XHDG25 [biliary_tract][gallbladder][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-6828-3p gacgaGAGCAGAagt AUCUGCUC m7b Created HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6843-3p gacGAGACCAgaagt AUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6848-3p gacGAGACCAgaagt GUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-7152-3p gacgaGACCAGAagt UCUGGUCC m7a Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-767-3p gacgaGAGCAGAagt UCUGCUCA m7a Created HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-3663-5p gacgAGACCAGaagt GCUGGUCU m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-3663-5p gacgAGACCAGaagt GCUGGUCU m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-767-3p gacgaGAGCAGAagt UCUGCUCA m7a Created HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-7152-3p gacgaGACCAGAagt UCUGGUCC m7a Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6848-3p gacGAGACCAgaagt GUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6843-3p gacGAGACCAgaagt AUGGUCUC m7b Disrupted HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965
hsa-miR-6828-3p gacgaGAGCAGAagt AUCUGCUC m7b Created HHHSH_3222_RPS23|NM_001025|exon_CDS|-6.47753991344453|0.173552400612965

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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