SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024855
Gene Symbol: ZNF197

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.44632167G>A COSM3067189 SNU-175 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-519e-3p attaatGGCACTTat AAGUGCCU m7a Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-519c-3p attaatgGCACTTat AAAGUGCA m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-519b-3p attaatgGCACTTat AAAGUGCA m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-519a-3p attaatgGCACTTat AAAGUGCA m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-520a-3p attaatgGCACTTat AAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-373-3p attaatgGCACTTat GAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-372-3p attaatgGCACTTat AAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-371b-3p attaatGGCACTTat AAGUGCCC m7a Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-371a-3p attaatGGCACTTat AAGUGCCG m7a Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-616-3p attAATGACacttat AGUCAUUG m6b Created HPHES_5345_G7090.1_44673658
hsa-miR-595 attaatgACACTTat GAAGUGUG m6b Created HPHES_5345_G7090.1_44673658
hsa-miR-520e attaatgGCACTTat AAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-520d-3p attaatgGCACTTat AAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-520c-3p attaatgGCACTTat AAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-520b attaatgGCACTTat AAAGUGCU m6b Disrupted HPHES_5345_G7090.1_44673658

Mutation Mutation ID Sample Name Cancer Type
chr3:g.44632158C>G COSM3823929 TCGA-AC-A23H-01 [breast][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-5696 aagAAATGAattaat CUCAUUUA m6b Created HPHES_5345_G7090.1_44673658
hsa-miR-4760-3p aagaaATGAATTaat AAAUUCAU m7b Created HPHES_5345_G7090.1_44673658
hsa-miR-664a-3p aagaAATGAATtaat UAUUCAUU m7b Created HPHES_5345_G7090.1_44673658

Mutation Mutation ID Sample Name Cancer Type
chr3:g.44632153G>T COSM1045033 TCGA-AX-A05Z-01 [endometrium][NS][carcinoma][endometrioid_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-578 aaccCAAGAAatcaa CUUCUUGU m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-635 aaCCCAAGaaatcaa ACUUGGGC m6b Disrupted HPHES_5345_G7090.1_44673658
hsa-miR-6774-5p aaCCCAAGaaatcaa ACUUGGGC m6b Disrupted HPHES_5345_G7090.1_44673658

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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