SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024847
Gene Symbol: TGFBR2
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Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr3:g.30691449T>C COSM1422344 TCGA-CK-6751-01 [large_intestine][caecum][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4264 cgttGACTGAGTgct ACUCAGUC m8a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381

Mutation Mutation ID Sample Name Cancer Type
chr3:g.30691449T>A COSM1422343 TCGA-D5-6533-01 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-3664-5p cgttgACAGAGTgct AACUCUGU m7b Created HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-6773-3p cgtTGACAGagtgct ACUGUCAC m6b Created HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-4264 cgttGACTGAGTgct ACUCAGUC m8a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381

Mutation Mutation ID Sample Name Cancer Type
chr3:g.30691447A>T COSM48813 16600 [lung][NS][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-1324 gacgtTGTCTGagtg CCAGACAG m6b Created HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-4264 gacgttGACTGAGTg ACUCAGUC m8a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381

Mutation Mutation ID Sample Name Cancer Type
chr3:g.30691435T>C COSM4733385 T3246 [large_intestine][colon][carcinoma][adenocarcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-767-5p gATGGTGCgtgagac UGCACCAU m7b Created HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-8485 gatgGTGTGTGagac CACACACA m7a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-377-3p gatggTGTGTGAgac AUCACACA m7b Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-767-5p gATGGTGCgtgagac UGCACCAU m7b Created HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-603 gatgGTGTGTGagac CACACACU m7a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-8485 gatgGTGTGTGagac CACACACA m7a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-362-3p gatGGTGTGTgagac AACACACC m7b Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-342-3p gatggtGTGTGAGAc UCUCACAC m8a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-329-3p gatGGTGTGTgagac AACACACC m7b Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-362-3p gatGGTGTGTgagac AACACACC m7b Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-603 gatgGTGTGTGagac CACACACU m7a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-377-3p gatggTGTGTGAgac AUCACACA m7b Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-342-3p gatggtGTGTGAGAc UCUCACAC m8a Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381
hsa-miR-329-3p gatGGTGTGTgagac AACACACC m7b Disrupted HHHNE_18795_TGFBR2|NM_003242|exon_CDS|-5.0172293214968|-1.25013545290381

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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