SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40334160G>C COSN8612743 4537_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-129-1-3p tcccaAAGGGCTTtg AAGCCCUU m8a Disrupted HPRT3_16632_G22076.1_40730170
hsa-miR-129-2-3p tcccaAAGGGCTTtg AAGCCCUU m8a Disrupted HPRT3_16632_G22076.1_40730170
hsa-miR-6740-5p tCCCAAACggctttg AGUUUGGG m7b Created HPRT3_16632_G22076.1_40730170

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40323328C>T COSN10030680 C0061T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 caacttGCAATAAat UUAUUGCU m7a Disrupted HPRT3_16626_G22068.1_40719326
hsa-miR-25-3p caactTGCAATaaat CAUUGCAC m6b Disrupted HPRT3_16626_G22068.1_40719326
hsa-miR-32-5p caactTGCAATAaat UAUUGCAC m7a Disrupted HPRT3_16626_G22068.1_40719326
hsa-miR-363-3p caactTGCAATaaat AAUUGCAC m6b Disrupted HPRT3_16626_G22068.1_40719326
hsa-miR-367-3p caactTGCAATaaat AAUUGCAC m6b Disrupted HPRT3_16626_G22068.1_40719326
hsa-miR-556-3p caacttGTAATAaat AUAUUACC m6b Created HPRT3_16626_G22068.1_40719326
hsa-miR-6504-3p caactTGTAATaaat CAUUACAG m6b Created HPRT3_16626_G22068.1_40719326
hsa-miR-6882-5p caACTTGTAataaat UACAAGUC m7a (m6a->m7a) HPRT3_16626_G22068.1_40719326
hsa-miR-92a-3p caactTGCAATAaat UAUUGCAC m7a Disrupted HPRT3_16626_G22068.1_40719326
hsa-miR-92b-3p caactTGCAATAaat UAUUGCAC m7a Disrupted HPRT3_16626_G22068.1_40719326

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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