SomamiR DB 2.0
Somatic mutations altering microRNA-ceRNA interactions
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PolymiRTS Database
Prediction criteria: TargetScan sites only     All 6mer or longer seed matches
Transcript ID: NM_001024843
Gene Symbol: TNRC6B
Browse Associations

Somatic mutations that impact miRNA target sites


Mutation Mutation ID Sample Name Cancer Type
chr22:g.40334178C>T COSN8010738 PCSI_0083_Pa_P_526 [pancreas][NS][carcinoma][NS]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-519b-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HPKTA_40206_G43252.1_40730181
hsa-miR-519a-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HPKTA_40206_G43252.1_40730181
hsa-miR-4797-5p atCTCTGTacttctt GACAGAGU m6b Created HPKTA_40206_G43252.1_40730181
hsa-miR-3919 aTCTCTGCacttctt GCAGAGAA m7a Disrupted HPKTA_40206_G43252.1_40730181
hsa-miR-519c-3p atctcTGCACTTctt AAAGUGCA m7b Disrupted HPKTA_40206_G43252.1_40730181
hsa-miR-3678-3p atCTCTGCActtctt CUGCAGAG m7b (m7b->m6b) HPKTA_40206_G43252.1_40730181
hsa-miR-5585-5p atctctGTACTTCtt UGAAGUAC m7b Created HPKTA_40206_G43252.1_40730181
hsa-miR-2467-3p atCTCTGCacttctt AGCAGAGG m6b Disrupted HPKTA_40206_G43252.1_40730181

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40324701G>A COSN8612740 4000_T [lung][NS][carcinoma][squamous_cell_carcinoma]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-4635 aCTTCAAGcgtttcc UCUUGAAG m7b Disrupted HPKTA_40192_G43238.1_40720693
hsa-miR-5707 actTCAAACGTttcc ACGUUUGA m8a Created HPKTA_40192_G43238.1_40720693

Mutation Mutation ID Sample Name Cancer Type
chr22:g.40323328C>T COSN10030680 C0061T [kidney][NS][other][neoplasm]
miRNA Targets Table
miR ID miRSite miRSeed SeedClass FuncClass Cluster ID
hsa-miR-137 caacttGCAATAAat UUAUUGCU m7a Disrupted HPKTA_40185_G43232.1_40719329
hsa-miR-25-3p caactTGCAATaaat CAUUGCAC m6b Disrupted HPKTA_40185_G43232.1_40719329
hsa-miR-32-5p caactTGCAATAaat UAUUGCAC m7a Disrupted HPKTA_40185_G43232.1_40719329
hsa-miR-363-3p caactTGCAATaaat AAUUGCAC m6b Disrupted HPKTA_40185_G43232.1_40719329
hsa-miR-367-3p caactTGCAATaaat AAUUGCAC m6b Disrupted HPKTA_40185_G43232.1_40719329
hsa-miR-556-3p caacttGTAATAaat AUAUUACC m6b Created HPKTA_40185_G43232.1_40719329
hsa-miR-6504-3p caactTGTAATaaat CAUUACAG m6b Created HPKTA_40185_G43232.1_40719329
hsa-miR-6882-5p caACTTGTAataaat UACAAGUC m7a (m6a->m7a) HPKTA_40185_G43232.1_40719329
hsa-miR-92a-3p caactTGCAATAaat UAUUGCAC m7a Disrupted HPKTA_40185_G43232.1_40719329
hsa-miR-92b-3p caactTGCAATAaat UAUUGCAC m7a Disrupted HPKTA_40185_G43232.1_40719329

*By default, only target sites identified by TargetScan are displayed. To display all potentially impacted target sites, select "All 6mer or longer seed matches" above.

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